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蛋白质-配体复合物中精氨酸残基与配体羧基相互作用时的相关键旋转

Correlated bond rotations in interactions of arginine residues with ligand carboxylate groups in protein ligand complexes.

作者信息

Nieto P M, Birdsall B, Morgan W D, Frenkiel T A, Gargaro A R, Feeney J

机构信息

Molecular Structure Division, National Institute for Medical Research, Mill Hill, London, UK.

出版信息

FEBS Lett. 1997 Mar 17;405(1):16-20. doi: 10.1016/s0014-5793(97)00147-6.

Abstract

The 1H/15N HSQC NMR spectra of complexes of Lactobacillus casei dihydrofolate reductase containing methotrexate recorded at 1 degree C show four resolved signals for the four NH(eta) protons of the Arg57 residue. This is consistent with hindered rotation in the guanidino group resulting from interactions with the alpha-carboxylate of methotrexate. Increasing the temperature causes exchange line-broadening and coalescence of signals. Rotation rates for the N(epsilon)C(zeta) and C(zeta)N(eta) bonds have been calculated from lineshape analysis and from zz-HSQC exchange experiments. The interactions between the methotrexate alpha-carboxylate group and the Arg57 guanidino group decrease the rotation rates for the N(epsilon)C(zeta) bond by about a factor of 10 and those for the C(zeta)N(eta) bonds by more than a factor of 100 with respect to their values in free arginine. Furthermore, the relative rates of rotation about these two bonds are reversed in the protein complexes compared with their values in free arginine indicating that there are concerted rotations about the N(epsilon)C(zeta) bond of the Arg57 guanidino group and the C'C(alpha) bond of the glutamate alpha-carboxylate group of methotrexate.

摘要

在1℃下记录的含有甲氨蝶呤的干酪乳杆菌二氢叶酸还原酶复合物的1H/15N HSQC NMR光谱显示,Arg57残基的四个NH(η)质子有四个分辨信号。这与由于与甲氨蝶呤的α-羧酸盐相互作用导致胍基旋转受阻一致。升高温度会导致信号的交换线宽化和合并。通过线形分析和zz-HSQC交换实验计算了N(ε)C(ζ)和C(ζ)N(η)键的旋转速率。与游离精氨酸中的值相比,甲氨蝶呤α-羧酸盐基团与Arg57胍基之间的相互作用使N(ε)C(ζ)键的旋转速率降低了约10倍,使C(ζ)N(η)键的旋转速率降低了100倍以上。此外,与游离精氨酸中的值相比,在蛋白质复合物中这两个键的相对旋转速率发生了反转,表明在Arg57胍基的N(ε)C(ζ)键和甲氨蝶呤谷氨酸α-羧酸盐基团的C'C(α)键周围存在协同旋转。

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