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乳糖操纵子的数学模型:诱导物排斥、分解代谢物阻遏以及在葡萄糖和乳糖上的二次生长

Mathematical model of the lac operon: inducer exclusion, catabolite repression, and diauxic growth on glucose and lactose.

作者信息

Wong P, Gladney S, Keasling J D

机构信息

Department of Chemical Engineering, University of California, Berkeley 94720-1462, USA.

出版信息

Biotechnol Prog. 1997 Mar-Apr;13(2):132-43. doi: 10.1021/bp970003o.

Abstract

A mathematical model of the lactose (lac) operon was developed to study diauxic growth on glucose and lactose. The model includes catabolite repression, inducer exclusion, lactose hydrolysis to glucose and galactose, and synthesis and degradation of allolactose. Two models for catabolite repression were tested: (i) cyclic AMP (cAMP) synthesis inversely correlated with the external glucose concentration and (ii) synthesis inversely correlated with the glucose transport rate. No significant differences in the two models were observed. In addition to synthesis, degradation and secretion of cAMP were also included in the model. Two models for the phosphorylation of the glucose produced from lactose hydrolysis were also tested: (i) phosphorylation by intracellular hexokinase and (ii) secretion of glucose and subsequent phosphorylation upon transport back into the cell. The latter model resulted in weak catabolite repression when the glucose produced from lactose was transported out of the cell, whereas the former model showed no catabolite repression during growth on lactose. Parameter sensitivity analysis indicates the importance of key parameters to lac operon expression and cell growth: the lactose and allolactose transformation rates by beta-galactosidase and the glucose concentrations that affect catabolite repression and inducer exclusion. Large values of the allolactose hydrolysis rate resulted in low concentrations of allolactose, low-level expression of the lac operon, and slow growth due to limited import and metabolism of lactose; small values resulted in a high concentration of allolactose, high-level expression of the lac operon, and slow growth due to a limiting concentration of glucose 6-phosphate formed from allolactose. Changes in the rates of all beta-galactosidase-catalyzed reactions showed similar behavior, but had more drastic effects on the growth rate. Changes in the glucose concentration that inhibited lactose transport could extend or contract the diauxic growth period during growth in the presence of glucose and lactose. Moreover, changes in the glucose concentration that affected catabolite repression affected the cAMP levels and lac operon expression, but had a lesser effect on the growth rate.

摘要

为了研究在葡萄糖和乳糖上的二次生长,构建了乳糖(lac)操纵子的数学模型。该模型包括分解代谢物阻遏、诱导物排除、乳糖水解为葡萄糖和半乳糖,以及别乳糖的合成与降解。测试了两种分解代谢物阻遏模型:(i)环腺苷酸(cAMP)合成与外部葡萄糖浓度呈负相关,以及(ii)合成与葡萄糖转运速率呈负相关。未观察到两种模型之间的显著差异。除了合成外,模型中还包括了cAMP的降解和分泌。还测试了乳糖水解产生的葡萄糖的两种磷酸化模型:(i)由细胞内己糖激酶进行磷酸化,以及(ii)葡萄糖分泌,随后在转运回细胞时进行磷酸化。当乳糖产生的葡萄糖被转运出细胞时,后一种模型导致较弱的分解代谢物阻遏,而前一种模型在乳糖生长期间未显示出分解代谢物阻遏。参数敏感性分析表明关键参数对lac操纵子表达和细胞生长的重要性:β-半乳糖苷酶对乳糖和别乳糖的转化率以及影响分解代谢物阻遏和诱导物排除的葡萄糖浓度。别乳糖水解速率的较大值导致别乳糖浓度低、lac操纵子低水平表达以及由于乳糖的有限导入和代谢而生长缓慢;较小的值导致别乳糖浓度高、lac操纵子高水平表达以及由于别乳糖形成的6-磷酸葡萄糖浓度限制而生长缓慢。所有β-半乳糖苷酶催化反应速率的变化表现出类似的行为,但对生长速率的影响更为剧烈。抑制乳糖转运的葡萄糖浓度变化可延长或缩短在葡萄糖和乳糖存在下生长期间的二次生长周期。此外,影响分解代谢物阻遏的葡萄糖浓度变化影响cAMP水平和lac操纵子表达,但对生长速率的影响较小。

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