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一种用于缩短沉降平衡实验中平衡时间的外推法。

An extrapolation method for reducing equilibration times in sedimentation equilibrium experiments.

作者信息

Correia J J, Yphantis D A

出版信息

Biophys J. 1977 Nov;20(2):153-68. doi: 10.1016/S0006-3495(77)85541-0.

Abstract

We present a detailed investigation of the use of an extrapolation technique to decrease running times of sedimentation equilibrium experiments. If concentration profiles are available at time delta tau, 2delta tau, 3delta tau,...., cn(r) = c(r, n delta tau), then the Aitken transformation replaces the cn(r) + ĉn(r) = [cn + 1(r) cn - 1(r) - c2n(r)]/[cn + 1(r) + cn - 1(r) - 2cn(r)]. We show that the ĉn(r) converge to the equilibrium values c infinity (r) much more quickly than the cn(r). Savings in time are shown to range from a factor of approximately 2 for meniscus depletion experiments to factors of between 4 and 8 for lower speeds or smaller molecular weights. It is also shown that the technique is quite sensitive to noise, so that an accurate optical system is required to allow its optimal use.

摘要

我们详细研究了一种外推技术在减少沉降平衡实验运行时间方面的应用。如果在时间间隔Δτ、2Δτ、3Δτ……时浓度分布可用,即cn(r) = c(r, nΔτ),那么艾特肯变换将cn(r)替换为ĉn(r) = [cn + 1(r)cn - 1(r) - c2n(r)] / [cn + 1(r) + cn - 1(r) - 2cn(r)]。我们表明,ĉn(r)比cn(r)更快地收敛到平衡值c∞(r)。时间节省情况显示,对于弯月面耗尽实验,节省因子约为2;对于较低速度或较小分子量,节省因子在4到8之间。还表明该技术对噪声相当敏感,因此需要精确的光学系统以实现其最佳应用。

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本文引用的文献

1
ACHIEVEMENT OF SEDIMENTATION EQUILIBRIUM.沉降平衡的达成
Proc Natl Acad Sci U S A. 1961 Nov;47(11):1848-52. doi: 10.1073/pnas.47.11.1848.
2
3
EQUILIBRIUM ULTRACENTRIFUGATION OF DILUTE SOLUTIONS.稀溶液的平衡超速离心法
Biochemistry. 1964 Mar;3:297-317. doi: 10.1021/bi00891a003.
4
Rapid determination of molecular weights of peptides and preteins.肽和蛋白质分子量的快速测定。
Ann N Y Acad Sci. 1960 Aug 31;88:586-601. doi: 10.1111/j.1749-6632.1960.tb20055.x.
6
Rapid preequilibrium determination of molecular weights in the ultracentrifuge.
Biochim Biophys Acta. 1973 Jan 25;295(1):18-29. doi: 10.1016/0005-2795(73)90069-x.

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