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引物决定了PCR介导的乙肝病毒DNA检测的灵敏度,用8-甲氧基补骨脂素对PCR混合物进行预处理可消除假阳性结果。

Primers determine the sensitivity of PCR-mediated hepatitis B virus DNA detection and pretreatment of PCR mixture with 8-methoxypsoralen eliminates false-positive results.

作者信息

Keum W K, Park C E, Lee J H, Khil L Y, Kang I, Kim S S, Jung J C, Oh S M, Woo H J, Lee J H, Kim Y C, Yoon Y, Choi J W, Ha J

机构信息

Department of Molecular Biology, School of Medicine, Kyung Hee University, Seoul, Korea.

出版信息

Mol Cells. 1997 Apr 30;7(2):244-50.

PMID:9163740
Abstract

Most methods for the diagnosis of hepatitis B virus (HBV) infection largely depend on viral DNA detection by polymerase chain reaction (PCR) or radioimmunological assay of viral antigens or antibodies. The quality assurance program recently established in Europe reported that PCR-mediated HBV DNA detection methods used in many laboratories produced a high rate of false-positive and false-negative results. Thus, we attempted to improve the conditions of current PCR methods for detection of HBV DNA. In the present study, we applied a recently developed method of releasing HBV DNA from virion by NaOH treatment of patient serum. Using four different primer sets specific to the HBV core region, we found that the sensitivity of first-round PCR can be improved by more than two orders of magnitude depending on the primers. The second round of PCR using nested primers was sensitive enough to detect up to 10(-6) pg of the HBV DNA, which is equivalent to approximately 3 copies of the HBV genome. Among the approximately 800 HBV-infected patient sera investigated in our laboratory, more than 60% of the tested samples gave positive results in the first-round PCR. The rate of positive results obtained using our experimental conditions is very high in comparison with other reports. The reamplification of the first-round PCR reaction mixture with the nested primers produced practically 100% positive results. For diagnosis of HBV infection, we routinely used 1 microliter of patient serum, which was found to be optimum in our laboratory. Surprisingly, from 20% of our positive results, even serum diluted to 1/100 (0.01 microliter) produced a stronger signal than 1 microliter. This observation suggests that direct PCR amplification of HBV DNA released from serum by NaOH treatment has to be compensated by other DNA detection methods for correct quantitation. In order to eliminate the false positive signal resulting from the carry-over due to massive screening of a large number of samples, PCR reaction mixture containing 8-methoxypsoralen was exposed to ultraviolet light prior to thermal cycle amplification. This exercise did not decrease the sensitivity of the detection method, but almost completely removed the false positive results caused by contaminated templates. We are in the process of improving PCR-mediated HBV DNA detection methods to attain more reliable and easily applicable methods.

摘要

大多数诊断乙型肝炎病毒(HBV)感染的方法很大程度上依赖于通过聚合酶链反应(PCR)检测病毒DNA或对病毒抗原或抗体进行放射免疫分析。欧洲最近建立的质量保证计划报告称,许多实验室使用的PCR介导的HBV DNA检测方法产生的假阳性和假阴性结果率很高。因此,我们试图改善当前用于检测HBV DNA的PCR方法的条件。在本研究中,我们应用了一种最近开发的方法,即通过对患者血清进行NaOH处理从病毒粒子中释放HBV DNA。使用四种针对HBV核心区域的不同引物组,我们发现第一轮PCR的灵敏度根据引物的不同可提高两个以上数量级。使用巢式引物进行的第二轮PCR灵敏度足以检测低至10^(-6) pg的HBV DNA,这相当于约3个HBV基因组拷贝。在我们实验室检测的约800份HBV感染患者血清中,超过60%的测试样本在第一轮PCR中呈阳性结果。与其他报告相比,使用我们的实验条件获得的阳性结果率非常高。用巢式引物对第一轮PCR反应混合物进行再扩增产生了几乎100%的阳性结果。对于HBV感染的诊断,我们常规使用1微升患者血清,发现在我们实验室中这是最佳用量。令人惊讶的是,在我们20%的阳性结果中,即使血清稀释至1/100(0.01微升)也比1微升产生更强的信号。这一观察结果表明,对于正确定量,通过NaOH处理从血清中释放的HBV DNA的直接PCR扩增必须由其他DNA检测方法来补充。为了消除由于大量样本大规模筛查导致的污染所产生的假阳性信号,在热循环扩增之前,将含有8-甲氧基补骨脂素的PCR反应混合物暴露于紫外线下。这一操作并没有降低检测方法的灵敏度,但几乎完全消除了由污染模板导致的假阳性结果。我们正在改进PCR介导的HBV DNA检测方法,以获得更可靠且易于应用的方法。

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