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内含子编码的聚腺苷酸化信号对tRNA抑制活性的调控。

Regulation of tRNA suppressor activity by an intron-encoded polyadenylation signal.

作者信息

Liang S, Briggs M W, Butler J S

机构信息

Department of Microbiology and Immunology, University of Rochester School of Medicine and Dentistry, New York 14618, USA.

出版信息

RNA. 1997 Jun;3(6):648-59.

PMID:9174099
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1369513/
Abstract

A 26-nt sequence from the 3' UTR of the yeast GAL7 mRNA directs accurate and efficient cleavage and polyadenylation to form the 3' end of the GAL7 mRNA in vivo and in vitro. Here we asked whether this polyadenylation signal can function within the context of a tRNA. Insertion of the GAL7 signal into the intron of the dominant SUP4 nonsense suppressor allowed us to judge the effect of the insert on SUP4 function by observation of nonsense suppression efficiency in vivo. The GAL7 signal impairs the function of SUP4 in an orientation-dependent manner in vivo, consistent with its ability to specify cleavage and polyadenylation in this context in vitro. Mutation of a UA repeat within the GAL7 signal restores SUP4 function partially, consistent with the role of this repeat as an efficiency element in polyadenylation. Mutations that impair the mRNA 3' end-processing factors Rna14p and Rna15p restore suppressor function partially. Northern blot analysis, PCR amplification, and DNA sequence analysis show that the GAL7 signal directs polyadenylation within the body of pre-SUP4 and within the terminator, suggesting that polyadenylation inhibits 5' and 3' end processing, as well as removal of the pre-tRNA intron. These findings indicate that the GAL7 polyadenylation signal is capable of targeting a pre-tRNA to the mRNA processing pathway.

摘要

酵母GAL7 mRNA 3'UTR的一段26个核苷酸的序列在体内和体外均可引导准确且高效的切割和聚腺苷酸化反应,从而形成GAL7 mRNA的3'末端。在此,我们探究了该聚腺苷酸化信号能否在tRNA的背景下发挥作用。将GAL7信号插入显性SUP4无义抑制基因的内含子中,使我们能够通过观察体内无义抑制效率来判断插入片段对SUP4功能的影响。在体内,GAL7信号以方向依赖的方式损害SUP4的功能,这与其在体外此背景下指定切割和聚腺苷酸化的能力一致。GAL7信号内UA重复序列的突变部分恢复了SUP4的功能,这与该重复序列作为聚腺苷酸化效率元件的作用相符。损害mRNA 3'末端加工因子Rna14p和Rna15p的突变部分恢复了抑制基因的功能。Northern印迹分析、PCR扩增和DNA序列分析表明,GAL7信号在pre-SUP4内部和终止子内引导聚腺苷酸化,这表明聚腺苷酸化抑制了5'和3'末端加工以及前体tRNA内含子的去除。这些发现表明,GAL7聚腺苷酸化信号能够将前体tRNA靶向至mRNA加工途径。

相似文献

1
Regulation of tRNA suppressor activity by an intron-encoded polyadenylation signal.内含子编码的聚腺苷酸化信号对tRNA抑制活性的调控。
RNA. 1997 Jun;3(6):648-59.
2
Pleiotropic effect of a point mutation in the yeast SUP4-o tRNA gene: in vivo pre-tRNA processing in S. cerevisiae.酵母SUP4-o tRNA基因中一个点突变的多效性效应:酿酒酵母体内前体tRNA加工
Nucleic Acids Res. 1992 Feb 25;20(4):791-6. doi: 10.1093/nar/20.4.791.
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A pre-tRNA carrying intron features typical of Archaea is spliced in yeast.携带古细菌典型内含子特征的前体tRNA在酵母中被剪接。
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Unusual aspects of in vitro RNA processing in the 3' regions of the GAL1, GAL7, and GAL10 genes in Saccharomyces cerevisiae.酿酒酵母中GAL1、GAL7和GAL10基因3'区域体外RNA加工的异常方面。
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In vitro polyadenylation is stimulated by the presence of an upstream intron.体外多聚腺苷酸化受到上游内含子存在的刺激。
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Yeast snoRNA accumulation relies on a cleavage-dependent/polyadenylation-independent 3'-processing apparatus.酵母小核仁RNA(snoRNA)的积累依赖于一种切割依赖性/多聚腺苷酸化非依赖性的3'加工机制。
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Polymerase chain reaction mapping of yeast GAL7 mRNA polyadenylation sites demonstrates that 3' end processing in vitro faithfully reproduces the 3' ends observed in vivo.酵母GAL7信使核糖核酸聚腺苷酸化位点的聚合酶链式反应图谱表明,体外3'端加工忠实地再现了体内观察到的3'端。
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Isolation of a yeast gene involved in species-specific pre-tRNA processing.参与物种特异性前体tRNA加工的酵母基因的分离
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In silico analysis of EST and genomic sequences allowed the prediction of cis-regulatory elements for Entamoeba histolytica mRNA polyadenylation.对EST和基因组序列进行的电子分析使得对溶组织内阿米巴mRNA聚腺苷酸化的顺式调控元件的预测成为可能。
Comput Biol Chem. 2008 Aug;32(4):256-63. doi: 10.1016/j.compbiolchem.2008.03.019. Epub 2008 Apr 12.

引用本文的文献

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Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis.真核生物中mRNA 3'末端的形成:机制、调控及其与mRNA合成其他步骤的相互关系
Microbiol Mol Biol Rev. 1999 Jun;63(2):405-45. doi: 10.1128/MMBR.63.2.405-445.1999.