• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于合理集选择和组合文库分析的相似性度量:基于不同属性衍生(DPD)的方法。

Similarity measures for rational set selection and analysis of combinatorial libraries: the Diverse Property-Derived (DPD) approach.

作者信息

Lewis R A, Mason J S, McLay I M

机构信息

Dagenham Research Centre, Rhone-Poulenc Rorer, Essex.

出版信息

J Chem Inf Comput Sci. 1997 May-Jun;37(3):599-614. doi: 10.1021/ci960471y.

DOI:10.1021/ci960471y
PMID:9177003
Abstract

The generation of new chemical leads for biological targets is a very challenging task for researchers in the pharmaceutical industry. The design of representative screening sets and combinatorial libraries is central to achieving this objective. In this paper, we describe a novel molecular descriptor, the Diverse Property-Derived (DPD) code, that contains information about key molecular and physicochemical properties of a molecule. The utility of this descriptor is explored through its application for the selection of a maximally diverse representative screening set, through the selection of secondary screening sets to obtain more information concerning the structure-activity relationships (SAR) of a particular target receptor, and through the profiling of combinatorial libraries. The usefulness of physicochemical/molecular property descriptors, such as the DPD code, is discussed critically.

摘要

对于制药行业的研究人员而言,为生物学靶点生成新的化学先导物是一项极具挑战性的任务。设计具有代表性的筛选集和组合文库是实现这一目标的核心。在本文中,我们描述了一种新型分子描述符——多样性质衍生(DPD)编码,它包含有关分子关键分子和物理化学性质的信息。通过将该描述符应用于选择最大程度多样化的代表性筛选集、选择二级筛选集以获取有关特定靶受体结构 - 活性关系(SAR)的更多信息以及组合文库的分析,来探索其效用。同时对物理化学/分子性质描述符(如DPD编码)的实用性进行了批判性讨论。

相似文献

1
Similarity measures for rational set selection and analysis of combinatorial libraries: the Diverse Property-Derived (DPD) approach.用于合理集选择和组合文库分析的相似性度量:基于不同属性衍生(DPD)的方法。
J Chem Inf Comput Sci. 1997 May-Jun;37(3):599-614. doi: 10.1021/ci960471y.
2
Selecting optimally diverse compounds from structure databases: a validation study of two-dimensional and three-dimensional molecular descriptors.从结构数据库中选择最优多样化的化合物:二维和三维分子描述符的验证研究
J Med Chem. 1997 Apr 11;40(8):1219-29. doi: 10.1021/jm960352+.
3
Comparison of methods for sequential screening of large compound sets.大型化合物集序贯筛选方法的比较
Comb Chem High Throughput Screen. 2006 Feb;9(2):115-22. doi: 10.2174/138620706775541882.
4
Pharmaceutical profiling in drug discovery.药物发现中的药物分析
Drug Discov Today. 2003 Apr 1;8(7):316-23. doi: 10.1016/s1359-6446(03)02649-7.
5
Exploring the chemogenomic knowledge space with annotated chemical libraries.利用注释化学文库探索化学基因组学知识空间。
Curr Opin Chem Biol. 2004 Aug;8(4):412-7. doi: 10.1016/j.cbpa.2004.06.003.
6
Rational combinatorial library design. 1. Focus-2D: a new approach to the design of targeted combinatorial chemical libraries.合理的组合库设计。1. Focus-2D:一种设计靶向组合化学库的新方法。
J Chem Inf Comput Sci. 1998 Mar-Apr;38(2):251-8. doi: 10.1021/ci970095x.
7
Drug discovery in the kinase inhibitory field using the Nested Chemical Library technology.利用嵌套化学文库技术在激酶抑制领域进行药物发现。
Assay Drug Dev Technol. 2005 Oct;3(5):543-51. doi: 10.1089/adt.2005.3.543.
8
How diverse are diversity assessment methods? A comparative analysis and benchmarking of molecular descriptor space.多样性评估方法有哪些差异?分子描述符空间的比较分析和基准测试。
J Chem Inf Model. 2014 Jan 27;54(1):230-42. doi: 10.1021/ci400469u. Epub 2013 Dec 13.
9
CLEVER: pipeline for designing in silico chemical libraries.CLEVER:用于设计计算机化学库的流程
J Mol Graph Model. 2009 Jan;27(5):578-83. doi: 10.1016/j.jmgm.2008.09.009. Epub 2008 Sep 26.
10
Natural product-like synthetic libraries.类似天然产物的合成文库。
Curr Opin Chem Biol. 2011 Aug;15(4):516-22. doi: 10.1016/j.cbpa.2011.05.022. Epub 2011 Jun 22.

引用本文的文献

1
Analysis of selection methodologies for combinatorial library design.
Mol Divers. 2003;6(2):121-33. doi: 10.1023/b:modi.0000006836.76687.8b.
2
Comments on the design of chemical libraries for screening.关于用于筛选的化学文库设计的评论。
Mol Divers. 2000;5(1):13-24. doi: 10.1023/a:1011326914800.
3
A genetic algorithm for the automated generation of small organic molecules: drug design using an evolutionary algorithm.一种用于自动生成小分子有机化合物的遗传算法:使用进化算法进行药物设计。
J Comput Aided Mol Des. 2000 Jul;14(5):449-66. doi: 10.1023/a:1008108423895.
4
A molecular-field-based similarity study of non-nucleoside HIV-1 reverse transcriptase inhibitors. 2. The relationship between alignment solutions obtained from conformationally rigid and flexible matching.基于分子场的非核苷类HIV-1逆转录酶抑制剂的相似性研究。2. 从构象刚性匹配和柔性匹配获得的比对结果之间的关系。
J Comput Aided Mol Des. 2000 Jan;14(1):39-51. doi: 10.1023/a:1008168228728.
5
The measurement of molecular diversity by receptor site interaction simulation.
J Comput Aided Mol Des. 1998 Sep;12(5):441-9. doi: 10.1023/a:1008023429373.