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罕见常染色体隐性疾病中基因内标记纯合性和单倍型共享的意义:以泛发性萎缩性良性大疱性表皮松解症中ⅩⅦ型胶原(COL17A1)基因座为例

Implications of intragenic marker homozygosity and haplotype sharing in a rare autosomal recessive disorder: the example of the collagen type XVII (COL17A1) locus in generalised atrophic benign epidermolysis bullosa.

作者信息

Scheffer H, Stulp R P, Verlind E, van der Meulen M, Bruckner-Tuderman L, Gedde-Dahl T, te Meerman G J, Sonnenberg A, Buys C H, Jonkman M F

机构信息

Department of Medical Genetics, University of Groningen, The Netherlands.

出版信息

Hum Genet. 1997 Aug;100(2):230-5. doi: 10.1007/s004390050496.

DOI:10.1007/s004390050496
PMID:9254855
Abstract

Generalised atrophic benign epidermolysis bullosa (GABEB) is a form of junctional epidermolysis bullosa with a recessive mode of inheritance. The gene considered likely to be involved in this disease is COL17A1, since in the majority of GABEB patients the product of that gene, the 180-kD bullous pemphigoid antigen (BP180), is undetectable in skin. We have identified an intragenic COL17A1 microsatellite marker for which 83% of randomly selected control individuals are heterozygous. We observed homozygosity for different alleles of this marker in five out of six collagen type XVII-negative GABEB patients of different European descent. Five of the six COL17A1 alleles of three patients originating from the eastern part of the Netherlands were identical, as were the haplotypes including flanking markers. The 2342delG mutation was identified in all these five alleles. This confirms the expectation that due to genetic drift and hidden inbreeding for an autosomal recessive disorder with low gene frequency, such as collagen type XVII-negative GABEB, most disease alleles from a restricted geographical area will be "identical by descent". Our results demonstrate that involvement of a candidate gene can be confirmed by looking for identity by descent of highly informative intragenic markers.

摘要

泛发性萎缩性良性大疱性表皮松解症(GABEB)是交界性大疱性表皮松解症的一种形式,呈隐性遗传模式。被认为可能与该疾病相关的基因是COL17A1,因为在大多数GABEB患者的皮肤中无法检测到该基因的产物,即180-kD大疱性类天疱疮抗原(BP180)。我们鉴定出一个COL17A1基因内微卫星标记,在随机选择的对照个体中,83%为杂合子。在6名不同欧洲血统的XVII型胶原阴性GABEB患者中,有5名患者该标记的不同等位基因出现纯合性。来自荷兰东部的3名患者的6个COL17A1等位基因中有5个相同,包括侧翼标记的单倍型也是如此。在所有这5个等位基因中均鉴定出2342delG突变。这证实了这样的预期,即对于像XVII型胶原阴性GABEB这种基因频率较低的常染色体隐性疾病,由于遗传漂变和隐藏的近亲繁殖,来自有限地理区域的大多数疾病等位基因将“同源相同”。我们的结果表明,通过寻找高信息性基因内标记的同源相同性,可以证实候选基因的参与情况。

相似文献

1
Implications of intragenic marker homozygosity and haplotype sharing in a rare autosomal recessive disorder: the example of the collagen type XVII (COL17A1) locus in generalised atrophic benign epidermolysis bullosa.罕见常染色体隐性疾病中基因内标记纯合性和单倍型共享的意义:以泛发性萎缩性良性大疱性表皮松解症中ⅩⅦ型胶原(COL17A1)基因座为例
Hum Genet. 1997 Aug;100(2):230-5. doi: 10.1007/s004390050496.
2
Generalized atrophic benign epidermolysis bullosa.泛发性萎缩性良性大疱性表皮松解症
Adv Dermatol. 1997;13:87-119; discussion 120.
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Cloning of the human type XVII collagen gene (COL17A1), and detection of novel mutations in generalized atrophic benign epidermolysis bullosa.人类 XVII 型胶原蛋白基因(COL17A1)的克隆以及泛发性萎缩性良性大疱性表皮松解症新突变的检测。
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Three novel homozygous point mutations and a new polymorphism in the COL17A1 gene: relation to biological and clinical phenotypes of junctional epidermolysis bullosa.COL17A1基因中的三个新型纯合点突变和一个新的多态性:与交界性大疱性表皮松解症的生物学和临床表型的关系。
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Premature termination codons are present on both alleles of the bullous pemphigoid antigen 2/type XVII collagen gene in five Austrian families with generalized atrophic benign epidermolysis bullosa.在五个患有全身性萎缩性良性大疱性表皮松解症的奥地利家族中,大疱性类天疱疮抗原2/ XVII型胶原蛋白基因的两个等位基因上均存在过早终止密码子。
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Compound heterozygosity for novel splice site mutations in the BPAG2/COL17A1 gene underlies generalized atrophic benign epidermolysis bullosa.BPAG2/COL17A1基因新型剪接位点突变的复合杂合性是泛发性萎缩性良性大疱性表皮松解症的基础。
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Compound heterozygosity for a dominant glycine substitution and a recessive internal duplication mutation in the type XVII collagen gene results in junctional epidermolysis bullosa and abnormal dentition.XVII型胶原蛋白基因中一个显性甘氨酸替代和一个隐性内部重复突变的复合杂合性导致交界性大疱性表皮松解症和异常牙列。
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Novel homozygous and compound heterozygous COL17A1 mutations associated with junctional epidermolysis bullosa.与交界性大疱性表皮松解症相关的新型纯合和复合杂合COL17A1突变
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Generalized atrophic benign epidermolysis bullosa. Either 180-kd bullous pemphigoid antigen or laminin-5 deficiency.泛发性萎缩性良性大疱性表皮松解症。180-kd大疱性类天疱疮抗原或层粘连蛋白-5缺乏。
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