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环电流对细胞色素中碳化学位移的影响。

The effect of ring currents on carbon chemical shifts in cytochromes.

作者信息

Blanchard L, Hunter C N, Williamson M P

机构信息

Krebs Institute, Department of Molecular Biology and Biotechnology, University of Sheffield, U.K.

出版信息

J Biomol NMR. 1997 Jun;9(4):389-95. doi: 10.1023/a:1018394410613.

Abstract

Calculations suggest that some carbon chemical shifts in proteins should have large ring current shifts (> 1 ppm). We present 13C, 15N and 1H assignments for cytochrome C2 from Rhodospirillum rubrum, compare these with shifts for other cytochromes c, and show that the calculated ring current shifts are similar to experimentally observed shifts, but that there remain substantial conformation-dependent shifts of side-chain carbons. Ring current shifts as large as 6 ppm are observed. We show that the ring current effects do not seriously affect the Chemical Shift Index method for delineating secondary structure, but may have an impact on more precise methods for generating structural constraints.

摘要

计算结果表明,蛋白质中的一些碳化学位移应该有较大的环电流位移(>1 ppm)。我们给出了来自红螺菌的细胞色素C2的13C、15N和1H归属,将这些与其他细胞色素c的位移进行了比较,并表明计算出的环电流位移与实验观察到的位移相似,但侧链碳仍存在大量构象依赖性位移。观察到高达6 ppm的环电流位移。我们表明,环电流效应不会严重影响用于描绘二级结构的化学位移指数方法,但可能会对生成结构约束的更精确方法产生影响。

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