Vazquez-Flota F, De Carolis E, Alarco A M, De Luca V
Département de Sciences Biologiques, Université de Montréal, Québec, Canada.
Plant Mol Biol. 1997 Aug;34(6):935-48. doi: 10.1023/a:1005894001516.
A 2-oxoglutarate-dependent dioxygenase (EC 1.14.11.11) which catalyzes the 4-hydroxylation of desacetoxyvindoline was purified to homogeneity. Three oligopeptides isolated from a tryptic digest of the purified protein were microsequenced and one oligopeptide showed significant homology to hyoscyamine 6 beta-hydroxylase from Hyoscyamus niger. A 36-mer degenerate oligonucleotide based on this peptide sequence was used to screen a Catharanthus roseus cDNA library and three clones, cD4H-1 to -3, were isolated. Although none of the three clones were full-length, the open reading frame on each clone encoded a putative protein containing the sequence of all three peptides. Primer extension analysis suggested that cD4H-3, the longest cDNA clone, was missing 156 bp at the 5' end of the clone and sequencing of the genomic clone, gD4H-8, confirmed these results. Southern blot analysis suggested that d4h is present as a single-copy gene in C. roseus which is a diploid plant, and the significant differences in the sequence of the 3'-UTR between cD4H-1 and -3 suggest that they represent dimorphic alleles of the same hydroxylase. The identity of the clone was further confirmed when extracts of transformed Escherichia coli expressed D4H enzyme activity. The D4H clone encoded a putative protein of 401 amino acids with a calculated molecular mass of 45.5 kDa and the amino acid sequence showed a high degree of similarity with those of a growing family of 2-oxoglutarate-dependent dioxygenases of plant and fungal origin. The similarity was not restricted to the dioxygenase protein sequences but was also extended to the gene structure and organization since the 205 and 1720 bp introns of d4h were inserted around the same highly conserved amino acid consensus sequences as those for e8 protein, hyoscyamine-6 beta-hydroxylase and ethylene-forming enzyme. These results provide further support that a common ancestral gene is responsible for the appearance of this family of dioxygenases. Hydroxylase assays and RNA blot hybridization studies showed that enzyme activity followed closely the levels of d4h transcripts, occurring predominantly in young leaves and in much lower levels in stems and fruits. In contrast, etiolated seedlings which contained considerable levels of d4h transcripts had almost undetectable hydroxylase activity, whereas exposure of seedlings to light resulted in a rapid increase of enzyme activity without a significant further increase in d4h transcripts over those detected in dark-grown seedlings. These results suggest that the activating effect of light may occur at a point downstream of transcription which remains to be elucidated.
一种催化去乙酰氧基长春多灵4-羟基化反应的2-氧代戊二酸依赖性双加氧酶(EC 1.14.11.11)被纯化至同质。从纯化蛋白的胰蛋白酶消化物中分离出的三个寡肽进行了微测序,其中一个寡肽与黑种草中的莨菪碱6β-羟化酶具有显著同源性。基于该肽序列的36聚体简并寡核苷酸用于筛选长春花cDNA文库,分离出三个克隆,即cD4H-1至-3。虽然这三个克隆都不是全长的,但每个克隆上的开放阅读框编码一个推定蛋白,该蛋白包含所有三个肽的序列。引物延伸分析表明,最长的cDNA克隆cD4H-3在克隆的5'端缺失156 bp,基因组克隆gD4H-8的测序证实了这些结果。Southern印迹分析表明,d4h在二倍体植物长春花中以单拷贝基因形式存在,cD4H-1和-3之间3'-UTR序列的显著差异表明它们代表同一羟化酶的双态等位基因。当转化的大肠杆菌提取物表现出D4H酶活性时,进一步证实了该克隆的身份。D4H克隆编码一个推定的401个氨基酸的蛋白,计算分子量为45.5 kDa,氨基酸序列与植物和真菌来源的不断增加的2-氧代戊二酸依赖性双加氧酶家族的序列具有高度相似性。这种相似性不仅限于双加氧酶蛋白序列,还扩展到基因结构和组织,因为d4h的205和1720 bp内含子插入在与e8蛋白、莨菪碱-6β-羟化酶和乙烯形成酶相同的高度保守氨基酸共有序列周围。这些结果进一步支持了一个共同的祖先基因导致了这个双加氧酶家族的出现。羟化酶测定和RNA印迹杂交研究表明,酶活性与d4h转录本水平密切相关,主要出现在幼叶中,在茎和果实中的水平要低得多。相反,含有相当水平d4h转录本的黄化幼苗几乎检测不到羟化酶活性,而将幼苗暴露于光照下会导致酶活性迅速增加,而d4h转录本没有比在黑暗生长的幼苗中检测到的水平有显著进一步增加。这些结果表明,光的激活作用可能发生在转录下游的一个点,这一点仍有待阐明。