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印记基因1(Peg1)的基因组结构及亲本来源特异性甲基化

Genomic structure and parent-of-origin-specific methylation of Peg1.

作者信息

Lefebvre L, Viville S, Barton S C, Ishino F, Surani M A

机构信息

Wellcome/CRC Institute of Cancer and Developmental Biology and Physiological Laboratory, University of Cambridge, UK.

出版信息

Hum Mol Genet. 1997 Oct;6(11):1907-15. doi: 10.1093/hmg/6.11.1907.

DOI:10.1093/hmg/6.11.1907
PMID:9302270
Abstract

We previously identified Peg1/Mest as a novel paternally expressed gene in the developing mouse embryo. The human PEG1 gene was recently assigned to 7q32 and shown to be imprinted and paternally expressed. Therefore, PEG1 deficiency could participate in the aetiology of pre- and post-natal growth retardation associated with maternal uniparental disomy 7 in humans. We have now initiated the characterization of the Peg1 locus in order to identify and dissect cis-acting elements implicated in its imprinted monoallelic expression. The genomic structure of Peg1 as well as the DNA sequence of the 5'-end of the gene, including 2.4 kb of promoter sequences and covering the first 2 exons, have been determined. Important sequence elements, such as a CpG island spanning exon 1 and direct repeats, are identified and discussed. To address the role of epigenetic modifications in the imprinting of Peg1, a methylation analysis of the Peg1 gene is presented. Partially methylated cytosine residues in 13.5 d.p.c. embryos and undifferentiated ES cells were identified. Using embryos carrying a targetted mutation at the Peg1 locus, we show that this partial promoter methylation pattern reflects a strict parent-of-origin-specific differential methylation: the expressed paternal allele is unmethylated, whereas the silenced maternal allele is fully methylated at the CpG sites studied. That the gametes carry the epigenetic information necessary to lay down this allele-specific methylation pattern is suggested by analysis of DNA isolated from sperm and parthenogenetic embryos.

摘要

我们之前鉴定出Peg1/Mest是发育中的小鼠胚胎中一个新的父系表达基因。人类PEG1基因最近被定位到7q32,并且显示为印记基因且父系表达。因此,PEG1缺陷可能参与了人类与母源单亲二体7相关的产前和产后生长迟缓的病因。我们现在已经开始对Peg1基因座进行特征分析,以鉴定和剖析与其印记单等位基因表达相关的顺式作用元件。已经确定了Peg1的基因组结构以及该基因5'端的DNA序列,包括2.4 kb的启动子序列并覆盖前2个外显子。鉴定并讨论了重要的序列元件,如跨越外显子1的一个CpG岛和直接重复序列。为了探讨表观遗传修饰在Peg1印记中的作用,我们对Peg1基因进行了甲基化分析。在13.5天龄的胚胎和未分化的胚胎干细胞中鉴定出了部分甲基化的胞嘧啶残基。利用在Peg1基因座携带靶向突变的胚胎,我们发现这种部分启动子甲基化模式反映了一种严格的亲本来源特异性差异甲基化:表达的父系等位基因未甲基化,而沉默的母系等位基因在所研究的CpG位点完全甲基化。对从精子和孤雌胚胎中分离的DNA进行分析表明,配子携带了建立这种等位基因特异性甲基化模式所需的表观遗传信息。

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