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将从菜豆中分离得到的奥地利根瘤菌和墨西哥分离株FL27归类为法国根瘤菌。

Classification of Austrian rhizobia and the Mexican isolate FL27 obtained from Phaseolus vulgaris L. as Rhizobium gallicum.

作者信息

Sessitsch A, Ramírez-Saad H, Hardarson G, Akkermans A D, de Vos W M

机构信息

Soil Science Unit, FAO/IAEA Agriculture and Biotechnology Laboratory, Agency's Laboratories, Seibersdorf, Austria.

出版信息

Int J Syst Bacteriol. 1997 Oct;47(4):1097-101. doi: 10.1099/00207713-47-4-1097.

DOI:10.1099/00207713-47-4-1097
PMID:9336913
Abstract

The phylogenetic positions of four rhizobial strains obtained from nodules of common bean plants (Phaseolus vulgaris L.) grown in an Austrian soil and of the Mexican bean isolate FL27 are described. Analysis of the 16S rRNA genes revealed sequences almost identical to that of the Rhizobium gallicum type strain, R602sp, with a maximum of two nucleotide substitutions. Comparison of the 16S rRNA gene sequences with those from other bacteria indicated highest similarity to Rhizobium sp. strain OK-50, Rhizobium leguminosarum IAM 12609, and Rhizobium etli. DNA homology determined by DNA-DNA hybridization was high among the Austrian isolates and R602spT (45 to 90%) and ranged from 21 to 65% with FL27, but hybridization analysis revealed very low homology to the recognized common bean-nodulating species, R. leguminosarum bv. phaseoli, R. etli, and Rhizobium tropici. Ribosomal gene organization was studied by Southern hybridization with the 16S rRNA gene and temperature gradient gel electrophoresis, indicating identical organizations and the presence of three identical 16S rRNA copies in the genome of this species. The six strains investigated showed different plasmid profiles based on their geographical origins. We propose that the Austrian isolates and the Mexican strain FL27 are members of the species R. gallicum.

摘要

描述了从生长在奥地利土壤中的普通菜豆(Phaseolus vulgaris L.)根瘤中获得的4株根瘤菌菌株以及墨西哥菜豆分离株FL27的系统发育位置。对16S rRNA基因的分析显示,其序列与法国根瘤菌模式菌株R602sp的序列几乎相同,最多有两个核苷酸替换。将16S rRNA基因序列与其他细菌的序列进行比较,结果表明与根瘤菌属菌株OK-50、豌豆根瘤菌IAM 12609和菜豆根瘤菌的相似性最高。通过DNA-DNA杂交测定的DNA同源性在奥地利分离株与R602spT之间较高(45%至90%),与FL27的同源性范围为21%至65%,但杂交分析显示与公认的普通菜豆结瘤物种——菜豆根瘤菌生物型菜豆、菜豆根瘤菌和热带根瘤菌的同源性非常低。通过用16S rRNA基因进行Southern杂交和温度梯度凝胶电泳研究核糖体基因组织,结果表明该物种基因组中的组织相同且存在三个相同的16S rRNA拷贝。所研究的6株菌株根据其地理来源显示出不同的质粒图谱。我们提出奥地利分离株和墨西哥菌株FL27是法国根瘤菌物种的成员。

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