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小鼠XV型胶原蛋白序列的克隆及相应基因定位于4B1-3。小鼠与人α1(XV)胶原蛋白序列的比较表明,小胶原蛋白结构域的数量存在差异。

Cloning of mouse type XV collagen sequences and mapping of the corresponding gene to 4B1-3. Comparison of mouse and human alpha 1 (XV) collagen sequences indicates divergence in the number of small collagenous domains.

作者信息

Hägg P M, Horelli-Kuitunen N, Eklund L, Palotie A, Pihlajaniemi T

机构信息

Collagen Research Unit, University of Oulu, Finland.

出版信息

Genomics. 1997 Oct 1;45(1):31-41. doi: 10.1006/geno.1997.4884.

DOI:10.1006/geno.1997.4884
PMID:9339358
Abstract

We report on full-length mouse type XV collagen cDNAs that encode a 1367-residue alpha 1(XV) chain. The amino acid sequences of the mouse and previously characterized human alpha 1(XV) chains exhibit an overall identity of 72%. The highest homology between these chains and to the structurally related type XVIII collagen is observed in their C-terminal noncollagenous domains. Although the mouse and human alpha 1(XV) chains are highly homologous and similar in their overall domain structure, the mouse chain contains only seven collagenous domains, whereas the human chain contains nine. Northern analysis of several mouse tissues indicated strong hybridization in the case of heart and skeletal muscle RNAs and moderate signals with kidney, lung, and testis RNAs. Analysis of type XV collagen mRNA levels at different stages of mouse embryonic development indicated a marked increase in the level between 11 and 15 days of development, which coincides with pronounced development of the muscles, heart, and vascular system in the mouse embryo. The mouse gene for type XV collagen was mapped by fluorescence in situ hybridization to chromosome 4, band B1-3. This result indicates that the mouse type XV collagen gene and its human counterpart are located in the chromosomal segments with conserved syntenies.

摘要

我们报道了编码1367个残基的α1(XV)链的全长小鼠XV型胶原蛋白cDNA。小鼠α1(XV)链与人α1(XV)链(此前已鉴定)的氨基酸序列总体一致性为72%。这些链与结构相关的XVIII型胶原蛋白之间的最高同源性出现在它们的C端非胶原结构域。尽管小鼠和人α1(XV)链高度同源且总体结构域相似,但小鼠链仅包含7个胶原结构域,而人链包含9个。对几种小鼠组织的Northern分析表明,心脏和骨骼肌RNA有强杂交信号,肾脏、肺和睾丸RNA有中等信号。对小鼠胚胎发育不同阶段的XV型胶原蛋白mRNA水平分析表明,在发育的11至15天之间水平显著增加,这与小鼠胚胎中肌肉、心脏和血管系统的明显发育相吻合。通过荧光原位杂交将小鼠XV型胶原蛋白基因定位到4号染色体B1-3带。这一结果表明,小鼠XV型胶原蛋白基因及其人类对应基因位于具有保守同线性的染色体区段。

相似文献

1
Cloning of mouse type XV collagen sequences and mapping of the corresponding gene to 4B1-3. Comparison of mouse and human alpha 1 (XV) collagen sequences indicates divergence in the number of small collagenous domains.小鼠XV型胶原蛋白序列的克隆及相应基因定位于4B1-3。小鼠与人α1(XV)胶原蛋白序列的比较表明,小胶原蛋白结构域的数量存在差异。
Genomics. 1997 Oct 1;45(1):31-41. doi: 10.1006/geno.1997.4884.
2
Primary structure of the alpha 1 chain of mouse type XVIII collagen, partial structure of the corresponding gene, and comparison of the alpha 1(XVIII) chain with its homologue, the alpha 1(XV) collagen chain.小鼠ⅩⅧ型胶原蛋白α1链的一级结构、相应基因的部分结构以及α1(ⅩⅧ)链与其同源物α1(ⅩⅤ)胶原蛋白链的比较
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Complete primary structure of two variant forms of human type XVIII collagen and tissue-specific differences in the expression of the corresponding transcripts.人 XVIII 型胶原蛋白两种变体形式的完整一级结构及相应转录本表达的组织特异性差异
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The human alpha 1(XV) collagen chain contains a large amino-terminal non-triple helical domain with a tandem repeat structure and homology to alpha 1(XVIII) collagen.人类α1(XV)胶原蛋白链包含一个大的氨基末端非三螺旋结构域,具有串联重复结构且与α1(XVIII)胶原蛋白具有同源性。
J Biol Chem. 1994 Feb 11;269(6):4042-6.
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Alpha 1(XVIII), a collagen chain with frequent interruptions in the collagenous sequence, a distinct tissue distribution, and homology with type XV collagen.α1(XVIII),一种在胶原序列中频繁中断、具有独特组织分布且与XV型胶原具有同源性的胶原链。
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Isolation and sequencing of cDNAs for proteins with multiple domains of Gly-Xaa-Yaa repeats identify a distinct family of collagenous proteins.对具有多个Gly-Xaa-Yaa重复结构域的蛋白质的cDNA进行分离和测序,鉴定出一个独特的胶原质蛋白质家族。
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cDNA cloning and chromosomal mapping of the mouse type VII collagen gene (Col7a1): evidence for rapid evolutionary divergence of the gene.小鼠VII型胶原蛋白基因(Col7a1)的cDNA克隆及染色体定位:该基因快速进化分歧的证据
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Primary structure of the alpha 1 chain of human type XV collagen and exon-intron organization in the 3' region of the corresponding gene.人类XV型胶原蛋白α1链的一级结构及相应基因3'区域的外显子-内含子组织
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Structure of the mouse type XV collagen gene, Col15a1, comparison with the human COL15A1 gene and functional analysis of the promoters of both genes.小鼠XV型胶原蛋白基因(Col15a1)的结构、与人类COL15A1基因的比较以及两个基因启动子的功能分析。
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Cloning of the human and mouse type X collagen genes and mapping of the mouse type X collagen gene to chromosome 10.人类和小鼠X型胶原蛋白基因的克隆以及小鼠X型胶原蛋白基因在染色体10上的定位。
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