• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

烟草属rDNA的结构分析

Structural analysis of rDNA in the genus Nicotiana.

作者信息

Borisjuk N V, Davidjuk Y M, Kostishin S S, Miroshnichenco G P, Velasco R, Hemleben V, Volkov R A

机构信息

Institut für Pflanzengenetik und Kulturpflanzenforschung, Gatersleben, Germany.

出版信息

Plant Mol Biol. 1997 Nov;35(5):655-60. doi: 10.1023/a:1005856618898.

DOI:10.1023/a:1005856618898
PMID:9349286
Abstract

The nucleotide sequence of the intergenic spacer (IGS) region between the 25S and the 18S rRNA coding regions has been determined for tobacco (Nicotiana tabacum). The IGS (5140 bp in length) can be subdivided into several regions (I-VII) two of which, upstream and downstream of the putative transcription initiation site (TIS), contain prominent subrepeats (A and C). The unique sequence in the central part of the IGS (region IV) preceding the TIS is extremely AT-rich. The distance from the putative TIS to the 5' end of the 18S rRNA gene is 3005 bp. The IGS sequences are compared with potato (Solanum tuberosum) and tomato (Lycopersicon esculentum) IGS. Restriction mapping of 13 Nicotiana species shows that considerable rDNA repeat length heterogeneity in this genus is probably due to different numbers of A and C subrepeats.

摘要

已确定烟草(Nicotiana tabacum)25S和18S rRNA编码区之间基因间隔区(IGS)的核苷酸序列。IGS(长度为5140 bp)可细分为几个区域(I - VII),其中两个区域,即假定转录起始位点(TIS)的上游和下游,包含显著的亚重复序列(A和C)。TIS之前IGS中部(区域IV)的独特序列富含AT。从假定的TIS到18S rRNA基因5'端的距离为3005 bp。将IGS序列与马铃薯(Solanum tuberosum)和番茄(Lycopersicon esculentum)的IGS进行比较。对13种烟草属物种的限制性图谱分析表明,该属中相当大的rDNA重复长度异质性可能是由于A和C亚重复序列数量不同所致。

相似文献

1
Structural analysis of rDNA in the genus Nicotiana.烟草属rDNA的结构分析
Plant Mol Biol. 1997 Nov;35(5):655-60. doi: 10.1023/a:1005856618898.
2
Comparison of nuclear ribosomal RNA genes among Solanum species and other Solanaceae.茄属物种与其他茄科植物核糖体RNA基因的比较。
Genome. 1994 Apr;37(2):271-9. doi: 10.1139/g94-038.
3
Nucleotide sequence of the potato rDNA intergenic spacer.马铃薯核糖体DNA基因间隔区的核苷酸序列。
Plant Mol Biol. 1993 Jan;21(2):381-4. doi: 10.1007/BF00019953.
4
Gene conversion of ribosomal DNA in Nicotiana tabacum is associated with undermethylated, decondensed and probably active gene units.烟草核糖体DNA的基因转换与甲基化不足、解聚且可能活跃的基因单元有关。
Chromosoma. 2000 Jun;109(3):161-72. doi: 10.1007/s004120050424.
5
Length heterogeneity of the rRNA precursor in cucumber (Cucumis sativus).黄瓜(Cucumis sativus)中rRNA前体的长度异质性
Plant Mol Biol. 1990 Sep;15(3):465-74. doi: 10.1007/BF00019163.
6
Elimination and rearrangement of parental rDNA in the allotetraploid Nicotiana tabacum.异源四倍体烟草中亲本核糖体DNA的消除与重排。
Mol Biol Evol. 1999 Mar;16(3):311-20. doi: 10.1093/oxfordjournals.molbev.a026112.
7
Unusual structure of ribosomal DNA in the copepod Tigriopus californicus: intergenic spacer sequences lack internal subrepeats.桡足类动物加州虎斑猛水蚤核糖体DNA的异常结构:基因间隔序列缺乏内部亚重复序列。
Gene. 2005 Jan 3;344:105-13. doi: 10.1016/j.gene.2004.09.001.
8
Molecular evolution of the intergenic spacer in the nuclear ribosomal RNA genes of cucurbitaceae.葫芦科核糖体RNA基因间隔区的分子进化
J Mol Evol. 1993 Feb;36(2):144-52. doi: 10.1007/BF00166250.
9
Phylogenetic utility of the external transcribed spacer (ETS) of 18S-26S rDNA: congruence of ETS and ITS trees of Calycadenia (Compositae).18S - 26S核糖体DNA外部转录间隔区(ETS)的系统发育效用:卡利卡德尼亚属(菊科)ETS与ITS树的一致性
Mol Phylogenet Evol. 1998 Dec;10(3):449-63. doi: 10.1006/mpev.1998.0545.
10
The ribosomal intergenic spacer (IGS) in the potato and tobacco cyst nematodes, Globodera pallida, G. rostochiensis and G. tabacum.马铃薯和烟草胞囊线虫(G. pallida、G. rostochiensis 和 G. tabacum)核糖体基因间区(IGS)。
Mol Cell Probes. 2019 Dec;48:101441. doi: 10.1016/j.mcp.2019.101441. Epub 2019 Aug 27.

引用本文的文献

1
Structure and Methylation of 35S rDNA in Allopolyploids (2 = 4 = 32, BBDD) and (2 = 6 = 48, AABBDD) and Their Parental Species Show Evidence of Nucleolar Dominance.异源多倍体(2n = 4x = 32,BBDD)和(2n = 6x = 48,AABBDD)及其亲本物种中35S rDNA的结构与甲基化显示出核仁显性的证据。
Front Plant Sci. 2022 Jul 6;13:908218. doi: 10.3389/fpls.2022.908218. eCollection 2022.
2
The Ribosomal DNA Loci of the Ancient Monocot L. (Araceae) Contain Different Variants of the 35S and 5S Ribosomal RNA Gene Units.古老单子叶植物石柑属(天南星科)的核糖体DNA位点包含35S和5S核糖体RNA基因单位的不同变体。
Front Plant Sci. 2022 Mar 3;13:819750. doi: 10.3389/fpls.2022.819750. eCollection 2022.
3

本文引用的文献

1
Ribosomal RNA genes in plants: variability in copy number and in the intergenic spacer.植物核糖体 RNA 基因:拷贝数和基因间间隔的可变性。
Plant Mol Biol. 1987 Sep;9(5):509-20. doi: 10.1007/BF00015882.
2
Molecular evolution of the intergenic spacer in the nuclear ribosomal RNA genes of cucurbitaceae.葫芦科核糖体RNA基因间隔区的分子进化
J Mol Evol. 1993 Feb;36(2):144-52. doi: 10.1007/BF00166250.
3
Nucleotide sequence of the potato rDNA intergenic spacer.马铃薯核糖体DNA基因间隔区的核苷酸序列。
Personal Perspectives on Plant Ribosomal RNA Genes Research: From Precursor-rRNA to Molecular Evolution.
关于植物核糖体RNA基因研究的个人观点:从前体rRNA到分子进化
Front Plant Sci. 2021 Dec 21;12:797348. doi: 10.3389/fpls.2021.797348. eCollection 2021.
4
Mosaic Arrangement of the 5S rDNA in the Aquatic Plant (Lemnaceae).水生植物(浮萍科)中5S核糖体DNA的镶嵌排列
Front Plant Sci. 2021 Jun 24;12:678689. doi: 10.3389/fpls.2021.678689. eCollection 2021.
5
The fate of 35S rRNA genes in the allotetraploid grass Brachypodium hybridum. allotetraploid 杂种假高粱中 35S rRNA 基因的命运。
Plant J. 2020 Aug;103(5):1810-1825. doi: 10.1111/tpj.14869. Epub 2020 Jul 3.
6
Evolutional dynamics of 45S and 5S ribosomal DNA in ancient allohexaploid Atropa belladonna.古老异源六倍体颠茄中45S和5S核糖体DNA的进化动态
BMC Plant Biol. 2017 Jan 23;17(1):21. doi: 10.1186/s12870-017-0978-6.
7
Gene conversion events and variable degree of homogenization of rDNA loci in cultivars of Brassica napus.甘蓝型油菜品种中rDNA位点的基因转换事件及不同程度的同质化
Ann Bot. 2017 Jan;119(1):13-26. doi: 10.1093/aob/mcw187. Epub 2016 Oct 5.
8
Diversity and Inheritance of Intergenic Spacer Sequences of 45S Ribosomal DNA among Accessions of Brassica oleracea L. var. capitata.甘蓝变种(Brassica oleracea L. var. capitata)不同种质中45S核糖体DNA基因间隔区序列的多样性与遗传特性
Int J Mol Sci. 2015 Dec 3;16(12):28783-99. doi: 10.3390/ijms161226125.
9
Molecular organization of the 25S-18S rDNA IGS of Fagus sylvatica and Quercus suber: a comparative analysis.欧洲山毛榉和栓皮栎 25S-18S rDNA IGS 的分子组织:比较分析。
PLoS One. 2014 Jun 3;9(6):e98678. doi: 10.1371/journal.pone.0098678. eCollection 2014.
10
Early evolutionary colocalization of the nuclear ribosomal 5S and 45S gene families in seed plants: evidence from the living fossil gymnosperm Ginkgo biloba.早期种子植物核核糖体 5S 和 45S 基因家族的进化共定位:来自活化石裸子植物银杏的证据。
Heredity (Edinb). 2012 Jun;108(6):640-6. doi: 10.1038/hdy.2012.2. Epub 2012 Feb 22.
Plant Mol Biol. 1993 Jan;21(2):381-4. doi: 10.1007/BF00019953.
4
Functional analysis of Arabidopsis thaliana rRNA gene and spacer promoters in vivo and by transient expression.拟南芥rRNA基因和间隔区启动子在体内及瞬时表达中的功能分析
Proc Natl Acad Sci U S A. 1993 Aug 15;90(16):7528-32. doi: 10.1073/pnas.90.16.7528.
5
Structural organization and regulation of transcription by RNA polymerase I of plant nuclear ribosomal RNA genes.植物核糖核糖体RNA基因的RNA聚合酶I对转录的结构组织与调控
Results Probl Cell Differ. 1994;20:3-24. doi: 10.1007/978-3-540-48037-2_1.
6
Comparison of nuclear ribosomal RNA genes among Solanum species and other Solanaceae.茄属物种与其他茄科植物核糖体RNA基因的比较。
Genome. 1994 Apr;37(2):271-9. doi: 10.1139/g94-038.
7
Complex organization of the length heterogeneous 5' external spacer of mung bean (Vigna radiata) ribosomal DNA.绿豆(Vigna radiata)核糖体DNA长度异质性5'外部间隔区的复杂组织。
Genome. 1988 Oct;30(5):723-33. doi: 10.1139/g88-120.
8
The Cucurbita maxima ribosomal DNA intergenic spacer has a complex structure.笋瓜核糖体DNA基因间隔区具有复杂的结构。
Gene. 1989 Aug 15;80(2):239-48. doi: 10.1016/0378-1119(89)90288-6.
9
Transcription of tomato ribosomal DNA and the organization of the intergenic spacer.番茄核糖体DNA的转录及基因间隔区的组织
Mol Gen Genet. 1990 Mar;221(1):103-12. doi: 10.1007/BF00280374.
10
rDNA intergenic region from Arabidopsis thaliana. Structural analysis, intraspecific variation and functional implications.来自拟南芥的核糖体DNA基因间隔区。结构分析、种内变异及功能意义。
J Mol Biol. 1991 Oct 20;221(4):1209-22. doi: 10.1016/0022-2836(91)90929-z.