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人类GLI3基因的基因结构与等位基因表达分析

Gene structure and allelic expression assay of the human GLI3 gene.

作者信息

Kang S, Rosenberg M, Ko V D, Biesecker L G

机构信息

Laboratory of Genetic Disease Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892-4472, USA.

出版信息

Hum Genet. 1997 Dec;101(2):154-7. doi: 10.1007/s004390050605.

DOI:10.1007/s004390050605
PMID:9402960
Abstract

The GLI3 gene encodes a putative zinc finger transcription factor that is important in early vertebrate development. Haploinsufficiency of this gene has been associated with the Greig cephalopolysyndactyly syndrome and truncation mutations cause Pallister-Hall syndrome. In the course of studies to determine the etiology of Pallister-Hall syndrome, we required knowledge of the fine structure of GLI3 to perform detailed genetic and physical mapping and mutation screening of this gene. The coding region of GLI3 is composed of 14 exons, including a large exon of more than 2500 bp. In addition, the gene contains two intragenic dinucleotide repeats, and four single-base pair polymorphisms in the coding region. We have used these coding region polymorphisms to design an allele-specific expression study that will be useful for studying patients with Greig cephalopolysyndactyly syndrome. In addition, GLI3 should be considered a candidate gene for related developmental anomalies of humans. Such hypotheses will be more readily addressed with the availability of the fine structure of the gene and the allele-expression assay.

摘要

GLI3基因编码一种假定的锌指转录因子,该因子在脊椎动物早期发育中起重要作用。该基因的单倍剂量不足与Greig头多指(趾)综合征有关,而截短突变会导致Pallister-Hall综合征。在确定Pallister-Hall综合征病因的研究过程中,我们需要了解GLI3的精细结构,以便对该基因进行详细的遗传和物理图谱绘制以及突变筛查。GLI3的编码区由14个外显子组成,包括一个超过2500 bp的大外显子。此外,该基因包含两个基因内二核苷酸重复序列,以及编码区内的四个单碱基对多态性。我们利用这些编码区多态性设计了一项等位基因特异性表达研究,该研究将有助于研究Greig头多指(趾)综合征患者。此外,GLI3应被视为人类相关发育异常的候选基因。随着该基因精细结构和等位基因表达检测方法的出现,此类假设将更容易得到验证。

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1
Gene structure and allelic expression assay of the human GLI3 gene.人类GLI3基因的基因结构与等位基因表达分析
Hum Genet. 1997 Dec;101(2):154-7. doi: 10.1007/s004390050605.
2
Point mutations throughout the GLI3 gene cause Greig cephalopolysyndactyly syndrome.GLI3基因上的点突变会导致Greig头多指(趾)综合征。
Hum Mol Genet. 1999 Sep;8(9):1769-77. doi: 10.1093/hmg/8.9.1769.
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GLI3 frameshift mutations cause autosomal dominant Pallister-Hall syndrome.GLI3 移码突变导致常染色体显性遗传的帕利斯特-霍尔综合征。
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Molecular and clinical analyses of Greig cephalopolysyndactyly and Pallister-Hall syndromes: robust phenotype prediction from the type and position of GLI3 mutations.Greig头多指(趾)畸形综合征和帕利斯特-霍尔综合征的分子与临床分析:基于GLI3基因突变类型和位置的可靠表型预测
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GLI3 mutations in human disorders mimic Drosophila cubitus interruptus protein functions and localization.人类疾病中的GLI3突变模拟了果蝇分节基因中断蛋白的功能和定位。
Proc Natl Acad Sci U S A. 1999 Mar 16;96(6):2880-4. doi: 10.1073/pnas.96.6.2880.
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Point mutations in human GLI3 cause Greig syndrome.人类GLI3基因中的点突变会导致Greig综合征。
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Deletion of GLI3 supports the homology of the human Greig cephalopolysyndactyly syndrome (GCPS) and the mouse mutant extra toes (Xt).GLI3的缺失支持了人类Greig头多指(趾)综合征(GCPS)与小鼠突变体多趾(Xt)的同源性。
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Isolation of a yeast artificial chromosome contig spanning the Greig cephalopolysyndactyly syndrome (GCPS) gene region.跨越Greig头多指(趾)综合征(GCPS)基因区域的酵母人工染色体重叠群的分离。
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Overlap of PIV syndrome, VACTERL and Pallister-Hall syndrome: clinical and molecular analysis.
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The phenotypic spectrum of GLI3 morphopathies includes autosomal dominant preaxial polydactyly type-IV and postaxial polydactyly type-A/B; No phenotype prediction from the position of GLI3 mutations.GLI3形态病变的表型谱包括常染色体显性遗传的IV型轴前多指畸形和A/B型轴后多指畸形;无法根据GLI3突变的位置预测表型。
Am J Hum Genet. 1999 Sep;65(3):645-55. doi: 10.1086/302557.

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A novel missense in GLI3 possibly affecting one of the zinc finger domains may lead to postaxial synpolydactyly: case report.一个新的 GLI3 错义突变可能影响锌指结构域之一,可能导致轴后多指畸形:病例报告。
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New insights into genotype-phenotype correlation for GLI3 mutations.
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Crossed polydactyly type I caused by a point mutation in the GLI3 gene in a large Chinese pedigree.一个中国大家系中由GLI3基因突变导致的Ⅰ型交叉多指(趾)畸形
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The phenotypic spectrum of GLI3 morphopathies includes autosomal dominant preaxial polydactyly type-IV and postaxial polydactyly type-A/B; No phenotype prediction from the position of GLI3 mutations.GLI3形态病变的表型谱包括常染色体显性遗传的IV型轴前多指畸形和A/B型轴后多指畸形;无法根据GLI3突变的位置预测表型。
Am J Hum Genet. 1999 Sep;65(3):645-55. doi: 10.1086/302557.