Cohen D M, Bergman R N
Department of Physiology and Biophysics, University of Southern California School of Medicine, Los Angeles 90033, USA.
Am J Physiol. 1997 Dec;273(6):E1228-42. doi: 10.1152/ajpendo.1997.273.6.E1228.
Anaplerotic enzymes, such as pyruvate carboxylase or malic enzyme, catalyze reactions that fill up the pools of the citric acid cycle (CAC), thereby increasing the total mass of CAC intermediates. Relative anaplerosis (y) denotes the ratio of anaplerotic flux to the flux catalyzed by citrate synthase. We examine conventional methods [C. R. Malloy, A. D. Sherry, and F. M. H. Jeffrey. J. Biol. Chem. 263:6964-6971, 1988; C. R. Malloy, A. D. Sherry, and F. M. H. Jeffrey. Am. J. Physiol. 259 (Heart Circ. Physiol. 28): H987-H995, 1990] of measurement of y using 13C-labeled precursors and analysis of [13C]glutamate labeling by nuclear magnetic resonance (NMR) spectroscopy. Through mathematical analysis and computer simulation, we show that isotopic enrichment of the pool of pyruvate that is substrate for anaplerosis will severely decrease the accuracy of estimates of y made with conventional methods no matter how small the mass of the pool of pyruvate. Suppose that the recycling parameter R denotes the fraction of molecules of pyruvate that contain carbons derived from intermediates of the CAC. Each means of estimation of relative anaplerosis in the peer-reviewed literature assumes that R = O, although this assumption has not been confirmed by experiment. We show that conventional formulas, using either fractional enrichments of carbons or isotopomer analysis, actually estimate at most y.(1 - R) instead of y during administration of [2-13C]acetate and unlabeled pyruvate. Using a new formula for estimation of y, we recalculate values of y from the literature and find them approximately 50% too low. We assume that all anaplerosis is via pyruvate and that the difference in isotopic enrichment between cytosolic and mitochondrial malate is negligible.
回补酶,如丙酮酸羧化酶或苹果酸酶,催化补充柠檬酸循环(CAC)代谢物池的反应,从而增加CAC中间产物的总量。相对回补率(y)表示回补通量与柠檬酸合酶催化通量的比值。我们研究了使用13C标记前体和通过核磁共振(NMR)光谱分析[13C]谷氨酸标记来测量y的传统方法[C.R.马洛伊、A.D.谢里和F.M.H.杰弗里。《生物化学杂志》263:6964 - 6971,1988;C.R.马洛伊、A.D.谢里和F.M.H.杰弗里。《美国生理学杂志》259(心脏循环生理学28):H987 - H995,1990]。通过数学分析和计算机模拟,我们表明作为回补底物的丙酮酸池的同位素富集将严重降低用传统方法估计y的准确性,无论丙酮酸池的质量有多小。假设循环参数R表示含有来自CAC中间产物碳的丙酮酸分子的比例。同行评审文献中每种估计相对回补率的方法都假设R = 0,尽管这一假设尚未得到实验证实。我们表明,在给予[2 - 13C]乙酸盐和未标记的丙酮酸期间,使用碳的分数富集或同位素异构体分析的传统公式实际上最多估计的是y·(1 - R)而不是y。使用一种新的估计y的公式,我们重新计算了文献中的y值,发现它们大约低了50%。我们假设所有回补都是通过丙酮酸进行的,并且细胞质和线粒体苹果酸之间的同位素富集差异可以忽略不计。