Seghieri P, Dussert C, Palmari J, Berthois Y, Martin P M, Penel C
Laboratoire de Cancérologie Expérimentale, INSERM CJF 9311, IFR J. Roche, Faculté de Médecine Nord, Marseille, France.
Int J Med Inform. 1997 Aug;46(1):53-65. doi: 10.1016/s1386-5056(97)00051-8.
A software was designed to simulate the calcium signal following hormone or growth factor stimulation in epithelial cells. The software written in C runs on a PC under Windows environment. It is based on a Markov process where the dynamic of the system is characterised by phenomenological transition probabilities. Moreover a minimal model is proposed to analyse the role of plasma channels and IP3 receptors, together with the opposite action of the CaATPase pumps, in the cytosolic and endoplasmic reticulum (ER) calcium signal control. The simulation is applied on the calcium response following stimulation by carbacol (protein G coupled receptors) or epidermal growth factor (tyrosine kinase type receptors) in A431 epithelial cells. The experimental calcium signals can be grouped in three classes; a spike and a return to the basal level (signal A), a spike and a decrease to a plateau level (signal B) or a slow increase to a plateau (signal C). Epidermal growth factor induces signal A and B while carbacol gives signal B and C. When a 'pseudo' steady state is reached oscillations occur. Computer simulations show that signal A can result from the activation of IP3 receptors while signal C would result from the activation of the plasma channels; signal B appears as the additive contribution of both channels, while oscillations are compatible with a calcium induced calcium release mechanism. Simulations suggest that the calcium dynamic in the ER is a mirror of cytosolic calcium but that a simple way to produce similar calcium elevation in these two compartments is to activate plasma channels. Implications of such a mechanism is discussed.
设计了一种软件来模拟上皮细胞中激素或生长因子刺激后的钙信号。用C语言编写的该软件在Windows环境下的个人电脑上运行。它基于一个马尔可夫过程,其中系统的动态由唯象跃迁概率来表征。此外,还提出了一个最小模型来分析质膜通道和IP3受体的作用,以及CaATPase泵的相反作用,在细胞质和内质网(ER)钙信号控制中的作用。该模拟应用于A431上皮细胞中卡巴胆碱(蛋白G偶联受体)或表皮生长因子(酪氨酸激酶型受体)刺激后的钙反应。实验性钙信号可分为三类:一个尖峰并回到基础水平(信号A)、一个尖峰并下降到平台水平(信号B)或缓慢上升到平台(信号C)。表皮生长因子诱导信号A和B,而卡巴胆碱产生信号B和C。当达到“伪”稳态时会出现振荡。计算机模拟表明,信号A可能源于IP3受体的激活,而信号C可能源于质膜通道的激活;信号B表现为两种通道的叠加贡献,而振荡与钙诱导的钙释放机制一致。模拟表明,内质网中的钙动态是细胞质钙的反映,但在这两个区室中产生类似钙升高的一种简单方法是激活质膜通道。讨论了这种机制的意义。