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1
Unusual features of the Drosophila melanogaster telomere transposable element HeT-A are conserved in Drosophila yakuba telomere elements.黑腹果蝇端粒转座因子HeT-A的异常特征在雅库布果蝇的端粒元件中保守存在。
Proc Natl Acad Sci U S A. 1998 Mar 31;95(7):3770-5. doi: 10.1073/pnas.95.7.3770.
2
The gag coding region of the Drosophila telomeric retrotransposon, HeT-A, has an internal frame shift and a length polymorphic region.果蝇端粒逆转座子HeT-A的gag编码区存在一个内部移码和一个长度多态性区域。
J Mol Evol. 1996 Dec;43(6):572-83. doi: 10.1007/BF02202105.
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HeT-A elements in Drosophila virilis: retrotransposon telomeres are conserved across the Drosophila genus.果蝇中的HeT-A元件:反转录转座子端粒在果蝇属中是保守的。
Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14091-6. doi: 10.1073/pnas.1936193100. Epub 2003 Nov 12.
4
Evolution of species-specific promoter-associated mechanisms for protecting chromosome ends by Drosophila Het-A telomeric transposons.果蝇 Het-A 端粒转座子通过物种特异性启动子相关机制来保护染色体末端的进化。
Proc Natl Acad Sci U S A. 2010 Mar 16;107(11):5064-9. doi: 10.1073/pnas.1000612107. Epub 2010 Mar 1.
5
Gag proteins of the two Drosophila telomeric retrotransposons are targeted to chromosome ends.两种果蝇端粒逆转座子的Gag蛋白定位于染色体末端。
J Cell Biol. 2002 Nov 11;159(3):397-402. doi: 10.1083/jcb.200205039. Epub 2002 Nov 4.
6
The two Drosophila telomeric transposable elements have very different patterns of transcription.两种果蝇端粒转座元件具有非常不同的转录模式。
Mol Cell Biol. 1999 Jan;19(1):873-81. doi: 10.1128/MCB.19.1.873.
7
Intracellular targeting of Gag proteins of the Drosophila telomeric retrotransposons.果蝇端粒逆转座子Gag蛋白的细胞内靶向定位
J Virol. 2003 Jun;77(11):6376-84. doi: 10.1128/jvi.77.11.6376-6384.2003.
8
Promoting in tandem: the promoter for telomere transposon HeT-A and implications for the evolution of retroviral LTRs.协同促进:端粒转座子HeT-A的启动子及其对逆转录病毒长末端重复序列进化的影响
Cell. 1997 Mar 7;88(5):647-55. doi: 10.1016/s0092-8674(00)81907-8.
9
HeT-A_pi1, a piRNA target sequence in the Drosophila telomeric retrotransposon HeT-A, is extremely conserved across copies and species.HeT-A_pi1 是果蝇端粒逆转录转座子 HeT-A 中的一个 piRNA 靶序列,在拷贝和物种中高度保守。
PLoS One. 2012;7(5):e37405. doi: 10.1371/journal.pone.0037405. Epub 2012 May 21.
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Drosophila telomeres: two transposable elements with important roles in chromosomes.果蝇端粒:在染色体中发挥重要作用的两个转座因子。
Genetica. 1999;107(1-3):189-96.

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Telomeric TART elements target the piRNA machinery in Drosophila.端粒 TART 元件在果蝇中靶向 piRNA 机制。
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2
Diversification and collapse of a telomere elongation mechanism.端粒延伸机制的多样化和崩溃。
Genome Res. 2019 Jun;29(6):920-931. doi: 10.1101/gr.245001.118. Epub 2019 May 28.
3
Altered Localization of Hybrid Incompatibility Proteins in Drosophila.果蝇杂种不亲和蛋白定位的改变。
Mol Biol Evol. 2019 Aug 1;36(8):1783-1792. doi: 10.1093/molbev/msz105.
4
Subcellular localization and Egl-mediated transport of telomeric retrotransposon HeT-A ribonucleoprotein particles in the Drosophila germline and early embryogenesis.端粒反转录转座子 HeT-A 核糖核蛋白颗粒在果蝇生殖细胞和早期胚胎发生中的亚细胞定位和 Egl 介导的运输。
PLoS One. 2018 Aug 29;13(8):e0201787. doi: 10.1371/journal.pone.0201787. eCollection 2018.
5
Recurrent Innovation at Genes Required for Telomere Integrity in Drosophila.果蝇端粒完整性所需基因的反复创新
Mol Biol Evol. 2017 Feb 1;34(2):467-482. doi: 10.1093/molbev/msw248.
6
General survey of hAT transposon superfamily with highlight on hobo element in Drosophila.hAT转座子超家族概述,重点介绍果蝇中的hobo元件。
Genetica. 2012 Sep;140(7-9):375-92. doi: 10.1007/s10709-012-9687-0. Epub 2012 Oct 31.
7
HeT-A_pi1, a piRNA target sequence in the Drosophila telomeric retrotransposon HeT-A, is extremely conserved across copies and species.HeT-A_pi1 是果蝇端粒逆转录转座子 HeT-A 中的一个 piRNA 靶序列,在拷贝和物种中高度保守。
PLoS One. 2012;7(5):e37405. doi: 10.1371/journal.pone.0037405. Epub 2012 May 21.
8
Drosophila telomeric retrotransposons derived from an ancestral element that was recruited to replace telomerase.果蝇端粒逆转座子起源于一个被招募来替代端粒酶的祖先元件。
Genome Res. 2007 Dec;17(12):1909-18. doi: 10.1101/gr.6365107. Epub 2007 Nov 7.
9
Strong regional heterogeneity in base composition evolution on the Drosophila X chromosome.果蝇X染色体碱基组成进化中的强烈区域异质性。
Genetics. 2006 Sep;174(1):349-62. doi: 10.1534/genetics.105.054346. Epub 2006 Mar 17.
10
Transposon telomeres are widely distributed in the Drosophila genus: TART elements in the virilis group.转座子端粒广泛分布于果蝇属:在果蝇种组中的TART元件。
Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3363-8. doi: 10.1073/pnas.0230353100. Epub 2003 Mar 7.

本文引用的文献

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Conserved subfamilies of the Drosophila HeT-A telomere-specific retrotransposon.果蝇HeT-A端粒特异性逆转座子的保守亚家族。
Genetics. 1998 Jan;148(1):233-42. doi: 10.1093/genetics/148.1.233.
2
Evolutionary links between telomeres and transposable elements.
Genetica. 1997;100(1-3):73-84.
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Programmed translational frameshifting in a gene required for yeast telomere replication.酵母端粒复制所需基因中的程序性翻译移码
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The catalytic subunit of yeast telomerase.酵母端粒酶的催化亚基。
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Telomerase catalytic subunit homologs from fission yeast and human.来自裂殖酵母和人类的端粒酶催化亚基同源物。
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Reverse transcriptase motifs in the catalytic subunit of telomerase.端粒酶催化亚基中的逆转录酶基序。
Science. 1997 Apr 25;276(5312):561-7. doi: 10.1126/science.276.5312.561.
7
Promoting in tandem: the promoter for telomere transposon HeT-A and implications for the evolution of retroviral LTRs.协同促进:端粒转座子HeT-A的启动子及其对逆转录病毒长末端重复序列进化的影响
Cell. 1997 Mar 7;88(5):647-55. doi: 10.1016/s0092-8674(00)81907-8.
8
The gag coding region of the Drosophila telomeric retrotransposon, HeT-A, has an internal frame shift and a length polymorphic region.果蝇端粒逆转座子HeT-A的gag编码区存在一个内部移码和一个长度多态性区域。
J Mol Evol. 1996 Dec;43(6):572-83. doi: 10.1007/BF02202105.
9
Drosophila telomeres: new views on chromosome evolution.果蝇端粒:染色体进化的新观点。
Trends Genet. 1996 Feb;12(2):48-52. doi: 10.1016/0168-9525(96)81399-0.
10
Terminal long tandem repeats in chromosomes form Chironomus pallidivittatus.染色体中的末端长串联重复序列形成了苍白摇蚊。
Mol Cell Biol. 1996 Jul;16(7):3285-90. doi: 10.1128/MCB.16.7.3285.

黑腹果蝇端粒转座因子HeT-A的异常特征在雅库布果蝇的端粒元件中保守存在。

Unusual features of the Drosophila melanogaster telomere transposable element HeT-A are conserved in Drosophila yakuba telomere elements.

作者信息

Danilevskaya O N, Tan C, Wong J, Alibhai M, Pardue M L

机构信息

Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

出版信息

Proc Natl Acad Sci U S A. 1998 Mar 31;95(7):3770-5. doi: 10.1073/pnas.95.7.3770.

DOI:10.1073/pnas.95.7.3770
PMID:9520442
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC19912/
Abstract

HeT-A was the first transposable element shown to have a bona fide role in chromosome structure, maintenance of telomeres in Drosophila melanogaster. HeT-A has hallmarks of non-long-terminal-repeat (non-LTR) retrotransposable elements but also has several unique features. We have now isolated HeT-A elements from Drosophila yakuba, showing that the retrotransposon mechanism of telomere maintenance predates the separation of D. melanogaster and D. yakuba (5-15 million years ago). HeT-A elements from the two species show significant sequence divergence, yet unusual features seen in HeT-Amel are conserved in HeT-Ayak. In both species, HeT-A elements are found in head-to-tail tandem arrays in telomeric heterochromatin. In both species, nearly half of the HeT-A sequence is noncoding and shows a distinctive imperfect repeat pattern of A-rich segments. Neither element encodes reverse transcriptase. The HeT-Amel promoter appears to be intermediate between the promoters of non-LTR and of LTR retrotransposons. The HeT-Ayak promoter shows similar features. HeT-Amel has a frameshift within the coding region. HeT-Ayak does not require a frameshift but shows conservation of the polypeptide sequence of the frameshifted product of D. melanogaster.

摘要

HeT-A是首个被证明在染色体结构中发挥真正作用的转座元件,它参与了黑腹果蝇端粒的维持。HeT-A具有非长末端重复(non-LTR)反转录转座元件的特征,但也有一些独特之处。我们现在已经从雅库布果蝇中分离出HeT-A元件,这表明端粒维持的反转录转座机制早于黑腹果蝇和雅库布果蝇的分化(500万至1500万年前)。来自这两个物种的HeT-A元件显示出显著的序列差异,但在HeT-Amel中发现的不寻常特征在HeT-Ayak中得以保留。在这两个物种中,HeT-A元件都以头对头的串联阵列形式存在于端粒异染色质中。在这两个物种中,HeT-A序列的近一半是非编码的,并且呈现出富含A片段的独特不完全重复模式。这两种元件都不编码逆转录酶。HeT-Amel启动子似乎介于非LTR和LTR反转录转座子的启动子之间。HeT-Ayak启动子也表现出类似的特征。HeT-Amel在编码区内有一个移码突变。HeT-Ayak不需要移码突变,但显示出黑腹果蝇移码产物多肽序列的保守性。