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转入分化细胞后Igf2和H19之间不存在增强子竞争。

The absence of enhancer competition between Igf2 and H19 following transfer into differentiated cells.

作者信息

Webber A L, Tilghman S M

机构信息

Howard Hughes Medical Institute and Department of Molecular Biology, Princeton University, New Jersey 08544, USA.

出版信息

Mol Cell Biol. 1998 Apr;18(4):1903-10. doi: 10.1128/MCB.18.4.1903.

DOI:10.1128/MCB.18.4.1903
PMID:9528761
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC121419/
Abstract

H19 and Igf2 are reciprocally imprinted genes that lie 90 kb apart on mouse chromosome 7. The two genes are coexpressed during development, with the H19 gene expressed exclusively from the maternal chromosome and Igf2 from the paternal chromosome. It has been proposed that their reciprocal imprinting is governed by a competition between the genes for a common set of enhancers. The competition on the paternal chromosome is influenced by extensive allele-specific methylation of the H19 gene and its 5' flank, which acts to inhibit H19 transcription and thus indirectly leads to the activation of the Igf2 gene. In contrast, no allele-specific methylation has been detected on the maternal chromosome, and the basis for the preference for H19 transcription on that chromosome is unresolved. In this investigation, the mechanism controlling the silencing of the Igf2 gene on the maternal chromosome was explored by studying the transcriptional activity of a yeast artificial chromosome (YAC) containing Igf2 and H19 following transfer into differentiated tissue culture cells. Contrary to expectations, both H19 and Igf2 were expressed from a single integrated copy of the YAC. Furthermore, Igf2 expression appeared to be independent of the H19 locus, based on deletions of the H19 gene promoter and its enhancers. These results suggest that an active process is responsible for the transcriptional bias toward H19 on the maternal chromosome and that the hypomethylated state of this chromosome cannot be viewed as a "default" state. Moreover, the active process is not reproduced in a differentiated cell and may require passage through the female germ line.

摘要

H19和Igf2是相互印记的基因,在小鼠7号染色体上相距90 kb。这两个基因在发育过程中共同表达,H19基因仅从母源染色体表达,Igf2从父源染色体表达。有人提出,它们的相互印记受这两个基因对一组共同增强子的竞争控制。父源染色体上的竞争受H19基因及其5'侧翼广泛的等位基因特异性甲基化影响,这种甲基化抑制H19转录,从而间接导致Igf2基因的激活。相反,在母源染色体上未检测到等位基因特异性甲基化,该染色体上H19转录偏好的基础仍未解决。在本研究中,通过研究转入分化的组织培养细胞后包含Igf2和H19的酵母人工染色体(YAC)的转录活性,探索了控制母源染色体上Igf2基因沉默的机制。与预期相反,H19和Igf2均从YAC的单个整合拷贝表达。此外,基于H19基因启动子及其增强子的缺失,Igf2的表达似乎独立于H19基因座。这些结果表明,一个活跃的过程导致了母源染色体上对H19的转录偏向,并且该染色体的低甲基化状态不能被视为“默认”状态。此外,这个活跃的过程在分化细胞中不会重现,可能需要通过雌性生殖系。

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The absence of enhancer competition between Igf2 and H19 following transfer into differentiated cells.转入分化细胞后Igf2和H19之间不存在增强子竞争。
Mol Cell Biol. 1998 Apr;18(4):1903-10. doi: 10.1128/MCB.18.4.1903.
2
Enhancer competition between H19 and Igf2 does not mediate their imprinting.H19与Igf2之间的增强子竞争并不介导它们的印记。
Proc Natl Acad Sci U S A. 1999 Aug 17;96(17):9733-8. doi: 10.1073/pnas.96.17.9733.
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Mechanisms of Igf2/H19 imprinting: DNA methylation, chromatin and long-distance gene regulation.Igf2/H19印记的机制:DNA甲基化、染色质与长距离基因调控。
J Biochem. 2000 May;127(5):711-5. doi: 10.1093/oxfordjournals.jbchem.a022661.
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Igf2 imprinting does not require its own DNA methylation or H19 RNA.胰岛素样生长因子2(Igf2)印记并不需要其自身的DNA甲基化或H19 RNA。
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An enhancer deletion affects both H19 and Igf2 expression.增强子缺失会影响H19和Igf2的表达。
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Location of enhancers is essential for the imprinting of H19 and Igf2 genes.增强子的定位对于H19和Igf2基因的印记至关重要。
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Developmental control of allelic methylation in the imprinted mouse Igf2 and H19 genes.印记小鼠Igf2和H19基因中等位基因甲基化的发育控制
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A transcriptional insulator at the imprinted H19/Igf2 locus.印记H19/Igf2基因座处的转录绝缘子。
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引用本文的文献

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Disruption of the Igf2 gene alters hepatic lipid homeostasis and gene expression in the newborn mouse.Igf2 基因缺失会改变新生鼠肝脏的脂质稳态和基因表达。
Am J Physiol Endocrinol Metab. 2018 Nov 1;315(5):E735-E744. doi: 10.1152/ajpendo.00048.2018. Epub 2018 Jul 17.
2
Parental allele-specific chromatin configuration in a boundary-imprinting-control element upstream of the mouse H19 gene.小鼠H19基因上游边界印记控制元件中的亲本等位基因特异性染色质构型。
Mol Cell Biol. 1999 Apr;19(4):2556-66. doi: 10.1128/MCB.19.4.2556.

本文引用的文献

1
Location of enhancers is essential for the imprinting of H19 and Igf2 genes.增强子的定位对于H19和Igf2基因的印记至关重要。
Nature. 1998 Feb 12;391(6668):711-5. doi: 10.1038/35655.
2
Imprinting in clusters: lessons from Beckwith-Wiedemann syndrome.簇状印记:来自贝克威思-维德曼综合征的教训。
Trends Genet. 1997 Aug;13(8):330-4. doi: 10.1016/s0168-9525(97)01200-6.
3
A 5' 2-kilobase-pair region of the imprinted mouse H19 gene exhibits exclusive paternal methylation throughout development.印记小鼠H19基因的一个5' 2千碱基对区域在整个发育过程中呈现出独特的父源甲基化。
Mol Cell Biol. 1997 Aug;17(8):4322-9. doi: 10.1128/MCB.17.8.4322.
4
Deletion of the H19 transcription unit reveals the existence of a putative imprinting control element.H19转录单元的缺失揭示了一个假定的印记控制元件的存在。
Genes Dev. 1997 Jun 15;11(12):1596-604. doi: 10.1101/gad.11.12.1596.
5
Genomic imprinting: nature and clinical relevance.基因组印记:本质与临床相关性。
Annu Rev Med. 1997;48:35-44. doi: 10.1146/annurev.med.48.1.35.
6
A method for high efficiency YAC lipofection into murine embryonic stem cells.一种将酵母人工染色体(YAC)高效脂质转染到小鼠胚胎干细胞中的方法。
Nucleic Acids Res. 1996 Dec 15;24(24):5054-5. doi: 10.1093/nar/24.24.5054.
7
A 5' differentially methylated sequence and the 3'-flanking region are necessary for H19 transgene imprinting.一个5' 差异甲基化序列和3' 侧翼区域对于H19转基因印记是必需的。
Mol Cell Biol. 1997 Jan;17(1):309-17. doi: 10.1128/MCB.17.1.309.
8
Imprinting mutation in the Beckwith-Wiedemann syndrome leads to biallelic IGF2 expression through an H19-independent pathway.贝克威思-维德曼综合征中的印记突变通过一条不依赖H19的途径导致双等位基因IGF2表达。
Hum Mol Genet. 1996 Dec;5(12):2027-32. doi: 10.1093/hmg/5.12.2027.
9
The structural H19 gene is required for transgene imprinting.转基因印记需要结构H19基因。
Proc Natl Acad Sci U S A. 1996 Nov 26;93(24):13876-83. doi: 10.1073/pnas.93.24.13876.
10
Mouse/human sequence divergence in a region with a paternal-specific methylation imprint at the human H19 locus.在人类H19基因座具有父系特异性甲基化印记的区域中的小鼠/人类序列差异。
Hum Mol Genet. 1996 Aug;5(8):1155-61. doi: 10.1093/hmg/5.8.1155.