Gisi D, Willi L, Traber H, Leisinger T, Vuilleumier S
Mikrobiologisches Institut, ETH Zürich, ETH-Zentrum, Switzerland.
Appl Environ Microbiol. 1998 Apr;64(4):1194-202. doi: 10.1128/AEM.64.4.1194-1202.1998.
Methylobacterium sp. strain DM4 and Methylophilus sp. strain DM11 can grow with dichloromethane (DCM) as the sole source of carbon and energy by virtue of homologous glutathione-dependent DCM dehalogenases with markedly different kinetic properties (the kcat values of the enzymes of these strains are 0.6 and 3.3 S-1, respectively, and the Km values are 9 and 59 microM, respectively). These strains, as well as transconjugant bacteria expressing the DCM dehalogenase gene (dcmA) from DM11 or DM4 on a broad-host-range plasmid in the background of dcmA mutant DM4-2cr, were investigated by growing them under growth-limiting conditions and in the presence of an excess of DCM. The maximal growth rates and maximal levels of dehalogenase for chemostat-adapted bacteria were higher than the maximal growth rates and maximal levels of dehalogenase for batch-grown bacteria. The substrate saturation constant of strain DM4 was much lower than the Km of its associated dehalogenase, suggesting that this strain is adapted to scavenge low concentrations of DCM. Strains and transconjugants expressing the DCM dehalogenase from strain DM11, on the other hand, had higher growth rates than bacteria expressing the homologous dehalogenase from strain DM4. Competition experiments performed with pairs of DCM-degrading strains revealed that a strain expressing the dehalogenase from DM4 had a selective advantage in continuous culture under substrate-limiting conditions, while strains expressing the DM11 dehalogenase were superior in batch culture when there was an excess of substrate. Only DCM-degrading bacteria with a dcmA gene similar to that from strain DM4, however, were obtained in batch enrichment cultures prepared with activated sludge from sewage treatment plants.
甲基杆菌属菌株DM4和嗜甲基菌属菌株DM11能够以二氯甲烷(DCM)作为唯一的碳源和能源生长,这得益于具有明显不同动力学特性的同源谷胱甘肽依赖性DCM脱卤酶(这些菌株的酶的kcat值分别为0.6和3.3 s-1,Km值分别为9和59 μM)。通过在生长限制条件下以及存在过量DCM的情况下培养这些菌株,以及在dcmA突变体DM4-2cr背景下在广宿主范围质粒上表达来自DM11或DM4的DCM脱卤酶基因(dcmA)的转接合子细菌,对它们进行了研究。恒化器适应细菌的最大生长速率和脱卤酶的最大水平高于分批培养细菌的最大生长速率和脱卤酶的最大水平。菌株DM4的底物饱和常数远低于其相关脱卤酶的Km值,这表明该菌株适合清除低浓度的DCM。另一方面,表达来自菌株DM11的DCM脱卤酶的菌株和转接合子比表达来自菌株DM4的同源脱卤酶的细菌具有更高的生长速率。用成对的DCM降解菌株进行的竞争实验表明,表达来自DM4的脱卤酶的菌株在底物限制条件下的连续培养中具有选择优势,而表达DM11脱卤酶的菌株在底物过量时的分批培养中更具优势。然而,在用污水处理厂的活性污泥制备的分批富集培养物中,仅获得了具有与菌株DM4相似的dcmA基因的DCM降解细菌。