Uemura K, Tokai H, Higuchi T, Murayama H, Yamamoto H, Enomoto Y, Fujiwara S, Hamada J, Yokota A
Plant Molecular Physiology Laboratory, Research Institute of Innovative Technology for the Earth (RITE), Kyoto, Japan.
Plant Cell Physiol. 1998 Feb;39(2):212-9. doi: 10.1093/oxfordjournals.pcp.a029359.
The biphasic reaction course, fallover, of carboxylation catalysed by ribulose 1,5-bisphosphate carboxylase/oxygenase (RuBisCO) has been known as a characteristic of the enzyme from higher land plants. Fallover consists of hysteresis in the reaction seen during the initial several minutes and a very slow suicide inhibition by inhibitors formed from the substrate ribulose-1,5-bisphosphate (RuBP). This study examined the relationship between occurrence of fallover and non-catalytic RuBP-binding sites, and the putative hysteresis-inducible sites (Lys-21 and Lys-305 of the large subunit in spinach RuBisCO) amongst RuBisCOs of a wide variety of photosynthetic organisms. Fallover could be detected by following the course of the carboxylase reaction at 1 mM RuBP and the non-catalytic binding sites by alleviation of fallover at 5 mM RuBP. RuBisCO from Euglena gracilis showed the same linear reaction course at both RuBP concentrations, indicating an association between an absence of fallover and an absence of the non-catalytic binding sites. This was supported by the results of an equilibrium binding assay for this enzyme with a transition state analogue. Green macroalgae and non-green algae contained the plant-type, fallover enzyme. RuBisCOs from Conjugatae, Closterium ehrenbergii, Gonatozygon monotaenium and Netrium digitus, showed a much smaller decrease in activity at 1 mM RuBP than the spinach enzyme and the reaction courses of these enzymes at 5 mM RuBP were almost linear. RuBisCO of a primitive type Conjugatae, Mesotaenium caldariorum, showed the same linear course at both RuBP concentrations. Sequencing of rbcL of these organisms indicated that Lys-305 was changed into arginine with Lys-21 conserved.
1,5-二磷酸核酮糖羧化酶/加氧酶(RuBisCO)催化的羧化反应的双相反应过程——反应速率下降,是高等陆生植物中该酶的一个特征。反应速率下降包括最初几分钟内反应中出现的滞后现象,以及由底物1,5-二磷酸核酮糖(RuBP)形成的抑制剂导致的非常缓慢的自杀抑制作用。本研究考察了各种光合生物的RuBisCO中反应速率下降的发生与非催化性RuBP结合位点之间的关系,以及推测的滞后诱导位点(菠菜RuBisCO大亚基中的赖氨酸-21和赖氨酸-305)。通过跟踪1 mM RuBP时羧化酶反应的进程可以检测到反应速率下降,通过5 mM RuBP时反应速率下降的缓解来检测非催化性结合位点。纤细裸藻的RuBisCO在两种RuBP浓度下均表现出相同的线性反应过程,表明不存在反应速率下降与不存在非催化性结合位点之间存在关联。该酶与过渡态类似物的平衡结合试验结果支持了这一点。绿色大型藻类和非绿色藻类含有植物型的、会出现反应速率下降的酶。来自接合藻纲、埃氏新月藻、单条四角藻和指状扁裸藻的RuBisCO在1 mM RuBP时活性下降幅度比菠菜酶小得多,这些酶在5 mM RuBP时的反应过程几乎是线性的。原始类型的接合藻纲的嗜热微星藻的RuBisCO在两种RuBP浓度下均表现出相同的线性过程。对这些生物的rbcL进行测序表明,赖氨酸-305变为精氨酸,而赖氨酸-21保守不变。