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相似文献

1
An rRNA fragment and its antisense can alter decoding of genetic information.一个核糖体RNA片段及其反义链能够改变遗传信息的解码。
J Bacteriol. 1998 May;180(10):2744-8. doi: 10.1128/JB.180.10.2744-2748.1998.
2
Suppression of nonsense mutations induced by expression of an RNA complementary to a conserved segment of 23S rRNA.通过表达与23S rRNA保守区段互补的RNA来抑制无义突变。
J Bacteriol. 1999 Sep;181(17):5257-62. doi: 10.1128/JB.181.17.5257-5262.1999.
3
Variety of nonsense suppressor phenotypes associated with mutational changes at conserved sites in Escherichia coli ribosomal RNA.与大肠杆菌核糖体RNA保守位点突变相关的多种无义抑制表型。
Biochem Cell Biol. 1995 Nov-Dec;73(11-12):925-31. doi: 10.1139/o95-100.
4
UGA suppression by a mutant RNA of the large ribosomal subunit.大亚基突变RNA对UGA的抑制作用。
Proc Natl Acad Sci U S A. 1995 Dec 19;92(26):12309-13. doi: 10.1073/pnas.92.26.12309.
5
The selective chemical modification of the 6-amino group of adenosine of the premature termination codon induces readthrough to produce full-length peptide in the reconstituted E. Coli translation system.在重组大肠杆菌翻译系统中,对提前终止密码子的腺苷酸6-氨基进行选择性化学修饰可诱导通读,从而产生全长肽。
Bioorg Med Chem. 2024 Sep 1;111:117868. doi: 10.1016/j.bmc.2024.117868. Epub 2024 Aug 10.
6
Mutant 16S ribosomal RNA: a codon-specific translational suppressor.突变型16S核糖体RNA:一种密码子特异性翻译抑制因子。
Proc Natl Acad Sci U S A. 1988 Jun;85(12):4162-5. doi: 10.1073/pnas.85.12.4162.
7
Mutations at three sites in the Escherichia coli 23S ribosomal RNA binding region for protein L11 cause UGA-specific suppression and conditional lethality.大肠杆菌23S核糖体RNA与蛋白质L11结合区域中三个位点的突变导致UGA特异性抑制和条件致死性。
Nucleic Acids Symp Ser. 1995(33):70-2.
8
Enhancement of +1 frameshift by polyamines during translation of polypeptide release factor 2 in Escherichia coli.在大肠杆菌中,多胺在多肽释放因子2翻译过程中增强+1移码。
J Biol Chem. 2006 Apr 7;281(14):9527-37. doi: 10.1074/jbc.M513752200. Epub 2006 Feb 13.
9
Growth phase dependent stop codon readthrough and shift of translation reading frame in Escherichia coli.大肠杆菌中生长阶段依赖性的终止密码子通读及翻译阅读框移位
FEBS Lett. 1998 Jan 16;421(3):237-42. doi: 10.1016/s0014-5793(97)01570-6.
10
Mutational eidence for a functional connection between two domains of 23S rRNA in translation termination.翻译终止过程中23S rRNA两个结构域之间功能联系的突变证据。
J Bacteriol. 2002 Sep;184(18):5052-7. doi: 10.1128/JB.184.18.5052-5057.2002.

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1
Prevalence of small base-pairing RNAs derived from diverse genomic loci.来源于不同基因组位置的小碱基配对 RNA 的流行。
Biochim Biophys Acta Gene Regul Mech. 2020 Jul;1863(7):194524. doi: 10.1016/j.bbagrm.2020.194524. Epub 2020 Mar 5.
2
The Ribosome as a Missing Link in Prebiotic Evolution III: Over-Representation of tRNA- and rRNA-Like Sequences and Plieofunctionality of Ribosome-Related Molecules Argues for the Evolution of Primitive Genomes from Ribosomal RNA Modules.核糖体作为前生物进化的缺失环节 III:tRNA 和 rRNA 样序列的过度表达以及核糖体相关分子的多功能性表明,原始基因组是从核糖体 RNA 模块进化而来的。
Int J Mol Sci. 2019 Jan 2;20(1):140. doi: 10.3390/ijms20010140.
3
Sources and Functions of Extracellular Small RNAs in Human Circulation.人体循环中细胞外小RNA的来源与功能
Annu Rev Nutr. 2016 Jul 17;36:301-36. doi: 10.1146/annurev-nutr-071715-050711. Epub 2016 May 13.
4
Mutational eidence for a functional connection between two domains of 23S rRNA in translation termination.翻译终止过程中23S rRNA两个结构域之间功能联系的突变证据。
J Bacteriol. 2002 Sep;184(18):5052-7. doi: 10.1128/JB.184.18.5052-5057.2002.
5
Mutations in the GTPase center of Escherichia coli 23S rRNA indicate release factor 2-interactive sites.大肠杆菌23S rRNA鸟苷三磷酸酶中心的突变表明了释放因子2的相互作用位点。
J Bacteriol. 2002 Feb;184(4):1200-3. doi: 10.1128/jb.184.4.1200-1203.2002.
6
A mechanism for stop codon recognition by the ribosome: a bioinformatic approach.核糖体识别终止密码子的机制:一种生物信息学方法。
RNA. 2001 Dec;7(12):1683-92.
7
Covariance of complementary rRNA loop nucleotides does not necessarily represent functional pseudoknot formation in vivo.互补rRNA环核苷酸的协方差不一定代表体内功能性假结的形成。
J Bacteriol. 2000 Oct;182(20):5671-5. doi: 10.1128/JB.182.20.5671-5675.2000.
8
Suppression of nonsense mutations induced by expression of an RNA complementary to a conserved segment of 23S rRNA.通过表达与23S rRNA保守区段互补的RNA来抑制无义突变。
J Bacteriol. 1999 Sep;181(17):5257-62. doi: 10.1128/JB.181.17.5257-5262.1999.
9
Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis.1类多肽释放因子高度保守的GGQ基序中的突变消除了人eRF1触发肽基-tRNA水解的能力。
RNA. 1999 Aug;5(8):1014-20. doi: 10.1017/s135583829999043x.

本文引用的文献

1
The effects of mutation on the composition and properties of the A protein of Escherichia coli tryptohan synthetase.突变对大肠杆菌色氨酸合成酶A蛋白的组成和性质的影响。
Cold Spring Harb Symp Quant Biol. 1961;26:11-24. doi: 10.1101/sqb.1961.026.01.006.
2
The nucleotide sequence of the first externally suppressible--1 frameshift mutant, and of some nearby leaky frameshift mutants.首个可外部抑制的 -1 移码突变体以及一些附近的渗漏移码突变体的核苷酸序列。
EMBO J. 1983;2(8):1345-50. doi: 10.1002/j.1460-2075.1983.tb01590.x.
3
Mutations in RNAs of both ribosomal subunits cause defects in translation termination.两个核糖体亚基的RNA发生突变会导致翻译终止缺陷。
EMBO J. 1998 Mar 2;17(5):1507-14. doi: 10.1093/emboj/17.5.1507.
4
The ribosome-in-pieces: binding of elongation factor EF-G to oligoribonucleotides that mimic the sarcin/ricin and thiostrepton domains of 23S ribosomal RNA.破碎核糖体:延伸因子EF-G与模拟23S核糖体RNA的肌动蛋白/蓖麻毒素及硫链丝菌素结构域的寡核糖核苷酸的结合
Proc Natl Acad Sci U S A. 1997 Nov 11;94(23):12280-4. doi: 10.1073/pnas.94.23.12280.
5
Phenotypic heterogeneity of mutational changes at a conserved nucleotide in 16 S ribosomal RNA.16S核糖体RNA中保守核苷酸处突变变化的表型异质性。
J Mol Biol. 1997 Apr 18;267(5):1113-23. doi: 10.1006/jmbi.1997.0943.
6
Role of the 5.8S rRNA in ribosome translocation.5.8S核糖体RNA在核糖体易位中的作用。
Nucleic Acids Res. 1997 May 1;25(9):1788-94. doi: 10.1093/nar/25.9.1788.
7
The RDP (Ribosomal Database Project).核糖体数据库项目(RDP)
Nucleic Acids Res. 1997 Jan 1;25(1):109-11. doi: 10.1093/nar/25.1.109.
8
Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic.与一种氨基糖苷类抗生素复合的大肠杆菌16S核糖体RNA A位点的结构。
Science. 1996 Nov 22;274(5291):1367-71. doi: 10.1126/science.274.5291.1367.
9
Three, four or more: the translational stop signal at length.三个、四个或更多:终止翻译的信号长度。
Mol Microbiol. 1996 Jul;21(2):213-9. doi: 10.1046/j.1365-2958.1996.6391352.x.
10
Hidden infidelities of the translational stop signal.翻译终止信号的隐匿不忠行为
Prog Nucleic Acid Res Mol Biol. 1996;52:293-335. doi: 10.1016/s0079-6603(08)60970-8.

一个核糖体RNA片段及其反义链能够改变遗传信息的解码。

An rRNA fragment and its antisense can alter decoding of genetic information.

作者信息

Arkov A L, Mankin A, Murgola E J

机构信息

Department of Molecular Genetics, The University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030, USA.

出版信息

J Bacteriol. 1998 May;180(10):2744-8. doi: 10.1128/JB.180.10.2744-2748.1998.

DOI:10.1128/JB.180.10.2744-2748.1998
PMID:9573162
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC107229/
Abstract

rRNA plays a central role in protein synthesis and is intimately involved in the initiation, elongation, and termination stages of translation. However, the mode of its participation in these reactions, particularly as to the decoding of genetic information, remains elusive. In this paper, we describe a new approach that allowed us to identify an rRNA segment whose function is likely to be related to translation termination. By screening an expression library of random rRNA fragments, we identified a fragment of the Escherichia coli 23S rRNA (nucleotides 74 to 136) whose expression caused readthrough of UGA nonsense mutations in certain codon contexts in vivo. The antisense RNA fragment produced a similar effect, but in neither case was readthrough of UAA or UAG observed. Since termination at UGA in E. coli specifically requires release factor 2 (RF2), our data suggest that the fragments interfere with RF2-dependent termination.

摘要

核糖体RNA(rRNA)在蛋白质合成中起核心作用,并密切参与翻译的起始、延伸和终止阶段。然而,其参与这些反应的方式,特别是在遗传信息解码方面,仍然难以捉摸。在本文中,我们描述了一种新方法,该方法使我们能够鉴定出一个rRNA片段,其功能可能与翻译终止有关。通过筛选随机rRNA片段的表达文库,我们鉴定出了大肠杆菌23S rRNA的一个片段(核苷酸74至136),其表达在体内某些密码子背景下导致UGA无义突变的通读。反义RNA片段产生了类似的效果,但在这两种情况下均未观察到UAA或UAG的通读。由于大肠杆菌中UGA处的终止特别需要释放因子2(RF2),我们的数据表明这些片段干扰了依赖RF2的终止。