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噬菌体分型和“双向核糖分型”在区分肠炎沙门氏菌菌株方面的实用性。

Usefulness of phage typing and "two-way ribotyping" to differentiate Salmonella enteritidis strains.

作者信息

Landeras E, Usera M A, Calderón C, Mendoza M C

机构信息

Dpto. de Biología Funcional, Universidad de Oviedo, España.

出版信息

Microbiologia. 1997 Dec;13(4):471-80.

PMID:9608521
Abstract

The capacity to differentiate Salmonella enteritidis strains by phage typing and "two-way ribotyping" performed with PstI and SphI was evaluated. The typeability was 96.8% in phage typing and 100% in ribotyping. The series was differentiated into 13 phage types, 19 combined ribotypes, and 39 subtypes or clonal lines by combining results from both methods (of which 11, 13, and 35, respectively, were represented by natural strains). Ribotyping differentiated strains ascribed to PTs 1, 4, 6a, 7, 8, RDNC and UPT. Conversely, some strains of PTs 1, 4, 5a, 6, 6a, 7, 34, RDNC and UPT fall into the most frequent combined ribotype. A dendrogram of genetic similarity generated from the combined ribotypes was traced, and, at a 0.82 similarity level, it showed a major cluster (including 17 combined ribotypes, 88.4% strains ascribed to all PTs tested except PT11), a minor cluster, and four additional lines more loosely related.

摘要

评估了通过噬菌体分型以及用PstI和SphI进行“双向核糖分型”来区分肠炎沙门氏菌菌株的能力。噬菌体分型的分型率为96.8%,核糖分型的分型率为100%。通过结合两种方法的结果,该系列被分为13种噬菌体类型、19种联合核糖型和39种亚型或克隆系(其中分别有11种、13种和35种由自然菌株代表)。核糖分型区分了归属于噬菌体分型1型、4型、6a型、7型、8型以及反应不典型和未分型的菌株。相反,噬菌体分型1型、4型、5a型、6型、6a型、7型、34型、反应不典型和未分型的一些菌株属于最常见的联合核糖型。绘制了由联合核糖型生成的遗传相似性树状图,在相似性水平为0.82时,它显示出一个主要聚类(包括17种联合核糖型,占除11型外所有测试噬菌体分型菌株的88.4%)、一个次要聚类以及另外四个关系更松散的分支。

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