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章鱼血蓝蛋白功能单元的晶体结构

Crystal structure of a functional unit from Octopus hemocyanin.

作者信息

Cuff M E, Miller K I, van Holde K E, Hendrickson W A

机构信息

Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA.

出版信息

J Mol Biol. 1998 May 15;278(4):855-70. doi: 10.1006/jmbi.1998.1647.

Abstract

Hemocyanins are giant oxygen transport proteins found in many arthropods and molluscs. Freely dissolved in the hemolymph, they are multisubunit proteins that contain many copies of the active site, a copper atom pair that reversibly binds oxygen. Octopus hemocyanin is composed of ten subunits, each of which contain seven oxygen-binding "functional units". The carboxyl-terminal 47 kDa functional unit, Odg, is a proteolytic isolate that binds oxygen reversibly while exhibiting slight Bohr and magnesium ion effects. In this work we present the X-ray structure determination and analysis of Odg at 2.3 A resolution. Odg has two structural domains: a largely alpha-helical copper binding domain, and a five-stranded anti-parallel beta-sandwich with the jelly roll topology found in many viruses. Six histidine residues ligate the copper atoms, one of which is involved in a thioether bridge. The results show that the hemocyanin from the mollusc and that from the arthropod have distinct tertiary folds in addition to the long recognized differences in their quaternary structures. Nonetheless, a comparison of Octopus and horseshoe crab hemocyanin reveals a similar active site, in a striking example of perhaps both convergent and divergent evolution.

摘要

血蓝蛋白是在许多节肢动物和软体动物中发现的巨型氧运输蛋白。它们自由溶解于血淋巴中,是多亚基蛋白,包含许多活性位点的拷贝,即一对可逆结合氧气的铜原子。章鱼血蓝蛋白由十个亚基组成,每个亚基包含七个氧结合“功能单元”。羧基末端47 kDa的功能单元Odg是一种蛋白水解分离物,它能可逆地结合氧气,同时表现出轻微的玻尔效应和镁离子效应。在这项工作中,我们展示了Odg在2.3 Å分辨率下的X射线结构测定和分析。Odg有两个结构域:一个主要是α螺旋的铜结合结构域,以及一个具有许多病毒中发现的果冻卷拓扑结构的五链反平行β折叠片层。六个组氨酸残基连接铜原子,其中一个参与硫醚桥的形成。结果表明,软体动物的血蓝蛋白和节肢动物的血蓝蛋白除了在四级结构上长期公认的差异外,还具有不同的三级折叠。尽管如此,章鱼和鲎血蓝蛋白的比较揭示了一个相似的活性位点,这是趋同进化和分歧进化的一个显著例子。

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