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卤虫卫星染色质的体外重建。

In vitro reconstitution of Artemia satellite chromatin.

作者信息

Motta M C, Landsberger N, Merli C, Badaracco G

机构信息

Dipartimento di Biologia Stutterale e Funzionale III Facoltá di Scienze, Universitá di Milano, 21100 Varese, Italy.

出版信息

J Biol Chem. 1998 Jul 17;273(29):18028-39. doi: 10.1074/jbc.273.29.18028.

Abstract

We report the characterization of an in vitro chromatin assembly system derived from Artemia embryos and its application to the study of AluI-113 satellite DNA organization in nucleosomes. The system efficiently reconstitutes chromatin templates by associating DNA, core histones, and H1. The polynucleosomal complexes show physiological spacing of repeat length 190 +/- 5 base pairs, and the internucleosomal distances are modulated by energy-using activities that contribute to the dynamics of chromatin conformation. The assembly extract was used to reconstitute tandemly repeated AluI-113 sequences. The establishment of preferred histone octamer/satellite DNA interactions was observed. In vitro, AluI-113 elements dictated the same nucleosome translational localizations as found in vivo. Specific rotational constraints seem to be the central structural requirement for nucleosome association. Satellite dinucleosomes showed decreased translational mobility compared with mononucleosomes. This could be the consequence of interactions between rotationally positioned nucleosomes separated by linker DNA of uniform length. AluI-113 DNA led to weak cooperativity of nucleosome association in the proximal flanking regions, which decreased with distance. Moreover, the structural properties of satellite chromatin can spread, thus leading to a specific organization of adjacent nucleosomes.

摘要

我们报道了一种源自卤虫胚胎的体外染色质组装系统的特性及其在核小体中AluI - 113卫星DNA组织研究中的应用。该系统通过将DNA、核心组蛋白和H1结合,有效地重构染色质模板。多核小体复合物显示出重复长度为190±5个碱基对的生理间距,并且核小体间距离受有助于染色质构象动态变化的耗能活动调节。组装提取物用于重构串联重复的AluI - 113序列。观察到了组蛋白八聚体/卫星DNA优先相互作用的建立。在体外,AluI - 113元件决定了与体内相同的核小体平移定位。特定的旋转限制似乎是核小体结合的核心结构要求。与单核小体相比,卫星双核小体的平移迁移率降低。这可能是由均匀长度的连接DNA分隔的旋转定位核小体之间相互作用的结果。AluI - 113 DNA在近端侧翼区域导致核小体结合的弱协同性,且这种协同性随距离降低。此外,卫星染色质的结构特性可以扩散,从而导致相邻核小体的特定组织形式。

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