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AraC引起的DNA弯曲:一个负向突变体。

DNA bending by AraC: a negative mutant.

作者信息

Saviola B, Seabold R R, Schleif R F

机构信息

Department of Biology, Johns Hopkins University, Baltimore, Maryland 21218, USA.

出版信息

J Bacteriol. 1998 Aug;180(16):4227-32. doi: 10.1128/JB.180.16.4227-4232.1998.

DOI:10.1128/JB.180.16.4227-4232.1998
PMID:9696773
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC107421/
Abstract

We sought a mutation in the DNA binding domain of the arabinose operon regulatory protein, AraC, of Escherichia coli that allows the protein to bind DNA normally but not activate transcription. The mutation was isolated by mutagenizing a plasmid overproducing a chimeric leucine zipper-AraC DNA binding domain and screening for proteins that were trans dominant negative with regard to wild-type AraC protein. The mutant with the lowest transcription activation of the araBAD promoter was studied further. It proved to alter a residue that had previously been demonstrated to contact DNA. Because the overproduced mutant protein still bound DNA in vivo, it is deficient in transcription activation for some reason other than absence of DNA binding. Using the phase-sensitive DNA bending assay, we found that wild-type AraC bends DNA about 90 degrees whereas the mutant bends DNA by a smaller amount.

摘要

我们在大肠杆菌阿拉伯糖操纵子调节蛋白AraC的DNA结合结构域中寻找一种突变,该突变能使该蛋白正常结合DNA,但不激活转录。通过对过量表达嵌合亮氨酸拉链 - AraC DNA结合结构域的质粒进行诱变,并筛选对野生型AraC蛋白具有反式显性负效应的蛋白质,分离出了该突变。对araBAD启动子转录激活作用最低的突变体进行了进一步研究。结果证明它改变了一个先前已证明与DNA接触的残基。由于过量表达的突变蛋白在体内仍能结合DNA,其转录激活缺陷是由DNA结合缺失以外的某种原因导致的。使用相敏DNA弯曲试验,我们发现野生型AraC使DNA弯曲约90度,而突变体使DNA弯曲的程度较小。

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1
DNA bending by AraC: a negative mutant.AraC引起的DNA弯曲:一个负向突变体。
J Bacteriol. 1998 Aug;180(16):4227-32. doi: 10.1128/JB.180.16.4227-4232.1998.
2
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本文引用的文献

1
Arm-domain interactions in AraC.阿拉伯糖操纵子调节蛋白(AraC)中的臂结构域相互作用
J Mol Biol. 1998 May 8;278(3):539-48. doi: 10.1006/jmbi.1998.1712.
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Catabolite gene activator protein mutations affecting activity of the araBAD promoter.影响araBAD启动子活性的分解代谢基因激活蛋白突变
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Transcription activation at class II CAP-dependent promoters.II类CAP依赖性启动子的转录激活
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Molecular anatomy of a transcription activation patch: FIS-RNA polymerase interactions at the Escherichia coli rrnB P1 promoter.转录激活区域的分子结构剖析:大肠杆菌rrnB P1启动子处FIS与RNA聚合酶的相互作用
EMBO J. 1997 Jan 2;16(1):154-62. doi: 10.1093/emboj/16.1.154.
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Transcription activation at class II CAP-dependent promoters: two interactions between CAP and RNA polymerase.II类CAP依赖性启动子的转录激活:CAP与RNA聚合酶之间的两种相互作用。
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J Mol Biol. 1996 Apr 26;258(1):14-24. doi: 10.1006/jmbi.1996.0230.
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Functional domains of the AraC protein.阿拉伯糖操纵子蛋白AraC的功能结构域。
Proc Natl Acad Sci U S A. 1993 Jun 15;90(12):5638-42. doi: 10.1073/pnas.90.12.5638.
9
AraC protein can activate transcription from only one position and when pointed in only one direction.阿糖胞苷蛋白只能从一个位置并仅在一个方向上激活转录。
J Mol Biol. 1993 May 20;231(2):205-18. doi: 10.1006/jmbi.1993.1276.
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Variation of half-site organization and DNA looping by AraC protein.AraC蛋白引起的半位点组织和DNA环化的变化。
EMBO J. 1993 Jan;12(1):35-44. doi: 10.1002/j.1460-2075.1993.tb05629.x.