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大肠杆菌中随机插入突变引起的适合度效应分布

Distribution of fitness effects caused by random insertion mutations in Escherichia coli.

作者信息

Elena S F, Ekunwe L, Hajela N, Oden S A, Lenski R E

机构信息

Center for Microbial Ecology, Michigan State University, East Lansing 48824, USA.

出版信息

Genetica. 1998;102-103(1-6):349-58.

PMID:9720287
Abstract

Very little is known about the distribution of mutational effects on organismal fitness, despite the fundamental importance of this information for the study of evolution. This lack of information reflects the fact that it is generally difficult to quantify the dynamic effects of mutation and natural selection using only static distributions of allele frequencies. In this study, we took a direct approach to measuring the effects of mutations on fitness. We used transposon-mutagenesis to create 226 mutant clones of Escherichia coli. Each mutant clone carried a single random insertion of a derivative of Tn10. All 226 mutants were independently derived from the same progenitor clone, which was obtained from a population that had evolved in a constant laboratory environment for 10,000 generations. We then performed competition experiments to measure the effect of each mutation on fitness relative to a common competitor. At least 80% of the mutations had a significant negative effect on fitness, whereas none of the mutations had a significant positive effect. The mutations reduced fitness by about 3%, on average, but the distribution of fitness effects was highly skewed and had a long, flat tail. A compound distribution, which includes both gamma and uniform components, provided an excellent fit to the observed fitness values.

摘要

尽管这些信息对于进化研究至关重要,但关于突变对生物体适应性影响的分布情况,我们所知甚少。信息的匮乏反映出这样一个事实:仅使用等位基因频率的静态分布来量化突变和自然选择的动态影响通常是困难的。在本研究中,我们采用了一种直接的方法来测量突变对适应性的影响。我们使用转座子诱变技术创建了226个大肠杆菌突变克隆。每个突变克隆都携带了一个Tn10衍生物的单个随机插入。所有226个突变体均独立来源于同一个祖代克隆,该祖代克隆取自一个在恒定实验室环境中进化了10000代的群体。然后,我们进行了竞争实验,以测量每个突变相对于一个共同竞争者对适应性的影响。至少80%的突变对适应性有显著的负面影响,而没有一个突变有显著的正面影响。这些突变平均使适应性降低了约3%,但适应性影响的分布高度偏态,且有一个长而平的尾部。一种包含伽马分布和均匀分布成分的复合分布,能很好地拟合观察到的适应性值。

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