Hamburgh M E, Drosopoulos W C, Prasad V R
Department of Microbiology and Immunology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA.
Nucleic Acids Res. 1998 Oct 1;26(19):4389-94. doi: 10.1093/nar/26.19.4389.
Two nucleoside analog resistance mutations in HIV-1 reverse transcriptase (RT), E89G and M184V, were previously shown to increase the dNTP insertion fidelity of HIV-1 RT. However, forward mutation assays using a lacZ alpha reporter gene have revealed a lack of impact on the overall error rate of these variants. In an effort to investigate the basis for this discrepancy, we have examined whether the increases in misinsertion fidelity observed for E89G and M184V RTs are accompanied by an increase in mispair extension fidelity. The relative efficiencies with which the wild type, E89G, M184V and M184V/E89G HIV-1 RTs extend model template-primer duplexes containing 3'-OH terminal mismatches were measured. The calculated efficiencies of mispair extension ( f ext) were, in general, not significantly decreased from the wild type HIV-1 RT. In fact, the efficiency of extension from one of the mispaired primer-template duplexes was significantly increased for two of the mutants tested. These results suggest that amino acid substitutions that increase the fidelity of dNTP insertion do not necessarily increase misextension fidelity, and that the decreased misextension fidelity may counterbalance the increases in misinsertion fidelity observed for E89G and M184V RTs.
人类免疫缺陷病毒1型(HIV-1)逆转录酶(RT)中的两种核苷类似物抗性突变E89G和M184V,先前已显示可提高HIV-1 RT的脱氧核苷三磷酸(dNTP)插入保真度。然而,使用lacZα报告基因进行的正向突变分析显示,这些变体对总体错误率没有影响。为了研究这种差异的原因,我们研究了E89G和M184V RT观察到的错配插入保真度增加是否伴随着错配延伸保真度的增加。测量了野生型、E89G、M184V和M184V/E89G HIV-1 RT延伸含有3'-OH末端错配的模型模板-引物双链体的相对效率。计算出的错配延伸效率(f ext)通常与野生型HIV-1 RT相比没有显著降低。事实上,在测试的两个突变体中,其中一个错配引物-模板双链体的延伸效率显著增加。这些结果表明,增加dNTP插入保真度的氨基酸取代不一定会增加错配延伸保真度,并且错配延伸保真度的降低可能会抵消E89G和M184V RT观察到的错配插入保真度的增加。