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鱿鱼肌球蛋白重链的氨基酸序列。

Amino-acid sequence of squid myosin heavy chain.

作者信息

Matulef K, Sirokmán K, Perreault-Micale C L, Szent-Györgyi A G

机构信息

Department of Biology, Brandeis University, Waltham, Massachusetts 02254-9110, USA.

出版信息

J Muscle Res Cell Motil. 1998 Aug;19(6):705-12. doi: 10.1023/a:1005341416989.

Abstract

This work describes the determination of the cDNA sequence encoding the myosin heavy chain (MHC) of the squid, Loligo pealei. To date, the amino-acid sequence of the MHC of calcium-regulated myosins is known only for two closely related species of scallops. We have determined the sequence of the entire coding region of the muscle MHC of squid, a cephalopod, and compared it with the MHC of scallops, which are pelecypods, and to other regulated and non-regulated myosins. Residues present in the MHC of only regulated myosins have been identified. The 6504 base pair (bp) sequence contains an open reading frame of 5805 nucleotides, which encodes 1935 amino acids. The sequence includes 697 bps of 3' untranslated sequence and 2 bps of 5' untranslated sequence. The deduced amino-acid sequence shows the squid MHC to be 72-73% identical and 86-87% similar to the calcium-regulated scallop MHCs cloned previously. In contrast, the squid MHC sequence is only 54-55% identical and 74% similar to skeletal MHCs of non-regulated myosins such as human fast skeletal embryonic and human perinatal skeletal muscle, and 39-40% identical and 60-62% similar to smooth muscle MHC of rabbit uterus muscle and chicken gizzard muscle, respectively. We have also detected two isoforms of the MHC in squid that appear to be spliced variants of a single myosin gene. These isoforms differ in the sequence encoding the surface loop at the nucleotide binding site. Taken together, our data may help to identify more precisely the residues that are crucial in regulated myosins.

摘要

这项工作描述了对枪乌贼(Loligo pealei)肌球蛋白重链(MHC)编码cDNA序列的测定。迄今为止,钙调节型肌球蛋白的MHC氨基酸序列仅在两种亲缘关系密切的扇贝物种中已知。我们已经测定了头足类动物枪乌贼肌肉MHC整个编码区的序列,并将其与双壳类动物扇贝的MHC以及其他调节型和非调节型肌球蛋白进行了比较。已鉴定出仅存在于调节型肌球蛋白MHC中的残基。该6504个碱基对(bp)的序列包含一个5805个核苷酸的开放阅读框,编码1935个氨基酸。该序列包括697个bp的3'非翻译序列和2个bp的5'非翻译序列。推导的氨基酸序列显示,枪乌贼MHC与先前克隆的钙调节型扇贝MHC的同一性为72 - 73%,相似性为86 - 87%。相比之下,枪乌贼MHC序列与非调节型肌球蛋白的骨骼肌MHC(如人类快速骨骼肌胚胎型和人类围产期骨骼肌)的同一性仅为54 - 55%,相似性为74%,与兔子宫肌和鸡胗肌的平滑肌MHC的同一性分别为39 - 40%,相似性为60 - 62%。我们还在枪乌贼中检测到了MHC的两种同工型,它们似乎是单个肌球蛋白基因的剪接变体。这些同工型在核苷酸结合位点编码表面环的序列上有所不同。综上所述,我们的数据可能有助于更精确地识别调节型肌球蛋白中至关重要的残基。

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