Mattinen M L, Linder M, Drakenberg T, Annila A
VTT Chemical Technology, Finland.
Eur J Biochem. 1998 Sep 1;256(2):279-86. doi: 10.1046/j.1432-1327.1998.2560279.x.
The solution structure of a synthetic 38-residue cellulose-binding domain (CBD) of endoglucanase I from Trichoderma reesei (CBD(EGI)) was determined by two-dimensional 1H-NMR spectroscopy. 100 structures were generated from a total of 599 NOE derived distance restraints and 28 phi and 14 chi dihedral angle restraints. For the final set of 19 selected structures, the rms deviation about the mean structure was 0.83+/-0.26 A for all atoms and 0.50+/-0.22 A for the backbone atoms. The structure of CBD(EGI) was very similar to that of CBD of cellobiohydrolase I from T reesei (CBD(CBHI)). The backbone trace of CBD(EGI) followed closely the irregular triple-stranded antiparallel beta-sheet structure of CBD(CBHI). Moreover, apart from the different side chains of Trp7 (CBD(EGI)) and Tyr5 (CBD(CBHI)), the cellulose-binding face of CBD(EGI) was similar to that of CBD(CBHI) within the precision of the structures. Finally, the interaction between CBD(EGI) and soluble sugars was investigated using cellopentaose and cellohexaose as substrates. Experiments showed that the interactions between CBD(EGI) and cellobiose units of sugars are specific, supporting the previously presented model for the CBD binding to crystalline cellulose.
通过二维¹H-NMR光谱法测定了里氏木霉内切葡聚糖酶I的合成38个残基纤维素结合结构域(CBD(EGI))的溶液结构。从总共599个源自NOE的距离约束以及28个φ和14个χ二面角约束中生成了100个结构。对于最终选定的19个结构,所有原子相对于平均结构的均方根偏差为0.83±0.26 Å,主链原子的均方根偏差为0.50±0.22 Å。CBD(EGI)的结构与里氏木霉纤维二糖水解酶I的CBD(CBD(CBHI))非常相似。CBD(EGI)的主链轨迹紧密遵循CBD(CBHI)的不规则三链反平行β-折叠结构。此外,除了Trp7(CBD(EGI))和Tyr5(CBD(CBHI))的不同侧链外,在结构精度范围内,CBD(EGI)的纤维素结合面与CBD(CBHI)的相似。最后,以纤维五糖和纤维六糖为底物研究了CBD(EGI)与可溶性糖之间的相互作用。实验表明,CBD(EGI)与糖的纤维二糖单元之间的相互作用具有特异性,支持了先前提出的CBD与结晶纤维素结合的模型。