Rice W R
Department of Biology, University of California, Santa Cruz 95064, USA.
Genetica. 1998;102-103(1-6):71-81.
A measure of the equilibrium load of deleterious mutations is developed that explicitly incorporates the level of genome-wide linkage disequilibrium. This measure, called the requisite mutational load, is based on the minimal net reproductive rate of the least mutated class necessary to prevent the deterministic mutation accumulation. If this minimal net reproductive rate is larger than ecological or physiological constraints allow, then: a) the population is driven to extinction via deterministic mutation accumulation, or b) a mutational Red-Queen ensues with adaptation counterbalancing mutation accumulation. Two population parameters determine the requisite mutational load: a) the equilibrium strength of selection, measured as a selection gradient, and b) the equilibrium opportunity for selection, measured as the variance in number of mutations per genome. The opportunity for selection is decomposed into the accumulation of mutations (average number per genome) and the level of genome-wide linkage disequilibrium. Recombination can substantially reduce the requisite mutational load, compared to clonal reproduction, when there is buffering and/or reinforcing epistasis and also when there is positive assortative mating for fitness. Recombination is advantageous because it reduces the negative (variance reducing) linkage disequilibrium induced by beneficial epistasis. The functional form of the expression for requisite mutational load illustrates why epistasis within pathways, i.e., among closely interacting genes, is a powerful alternative to genome-wide truncation selection, as a means of reducing mutational load.
我们开发了一种衡量有害突变平衡负荷的方法,该方法明确纳入了全基因组连锁不平衡水平。这种衡量方法称为必需突变负荷,它基于防止确定性突变积累所需的最少突变类别的最小净繁殖率。如果这个最小净繁殖率大于生态或生理限制所允许的范围,那么:a)种群通过确定性突变积累而灭绝,或者b)会出现一种突变的红皇后效应,适应与突变积累相互抵消。有两个种群参数决定必需突变负荷:a)选择的平衡强度,以选择梯度衡量;b)选择的平衡机会,以每个基因组突变数量的方差衡量。选择机会可分解为突变积累(每个基因组的平均数)和全基因组连锁不平衡水平。当存在缓冲和/或增强上位性时,以及当存在基于适合度的正选型交配时,与克隆繁殖相比,重组可以大幅降低必需突变负荷。重组是有利的,因为它减少了由有益上位性引起的负(方差减少)连锁不平衡。必需突变负荷表达式的函数形式说明了为什么途径内的上位性,即紧密相互作用基因之间的上位性,作为减少突变负荷的一种手段,是全基因组截短选择的有力替代方法。