牛呼吸道冠状病毒3'基因组部分（9.5 kb）编码的所有基因的核苷酸序列和预测的氨基酸序列，以及呼吸道和肠道冠状病毒之间的比较。
Nucleotide and predicted amino acid sequences of all genes encoded by the 3' genomic portion (9.5 kb) of respiratory bovine coronaviruses and comparisons among respiratory and enteric coronaviruses.
作者信息
Chouljenko V N, Kousoulas K G, Lin X, Storz J
机构信息
Department of Veterinary Microbiology and Parasitology, School of Veterinary Medicine, Louisiana State University, Baton Rouge 70803, USA.
出版信息
Virus Genes. 1998;17(1):33-42. doi: 10.1023/a:1008048916808.
Abstract
The 3'-ends of the genomes (9538 bp) of two wild-type respiratory bovine coronavirus (RBCV) isolates LSU and OK were obtained by cDNA sequencing. In addition, the 3'-end of the genome (9545) of the wild-type enteric bovine coronavirus (EBCV) strain LY-138 was assembled from available sequences and by cDNA sequencing of unknown genomic regions. Comparative analyses of RBCV and EBCV nucleotide and deduced amino acid sequences revealed that RBCV-specific nucleotide and amino acid differences were disproportionally concentrated within the S gene and the genomic region between the S and E genes. Comparisons among virulent and avirulent BCV strains revealed that virulence-specific nucleotide and amino acid changes were located within the S and E genes, and the 32 kDa open reading frame.
摘要
通过cDNA测序获得了两株野生型呼吸道牛冠状病毒（RBCV）分离株LSU和OK的基因组（9538 bp）的3'末端。此外，野生型肠道牛冠状病毒（EBCV）毒株LY-138的基因组3'末端（9545）是根据可用序列以及未知基因组区域的cDNA测序组装而成。对RBCV和EBCV核苷酸及推导氨基酸序列的比较分析表明，RBCV特异性的核苷酸和氨基酸差异不成比例地集中在S基因以及S基因和E基因之间的基因组区域内。强毒和无毒BCV毒株之间的比较显示，毒力特异性核苷酸和氨基酸变化位于S基因、E基因以及32 kDa开放阅读框内。
相似文献
1
Nucleotide and predicted amino acid sequences of all genes encoded by the 3' genomic portion (9.5 kb) of respiratory bovine coronaviruses and comparisons among respiratory and enteric coronaviruses.牛呼吸道冠状病毒3'基因组部分（9.5 kb）编码的所有基因的核苷酸序列和预测的氨基酸序列，以及呼吸道和肠道冠状病毒之间的比较。
Virus Genes. 1998;17(1):33-42. doi: 10.1023/a:1008048916808.
2
Molecular analysis of S gene of spike glycoprotein of winter dysentery bovine coronavirus circulated in Korea during 2002-2003.2002 - 2003年在韩国流行的冬季痢疾牛冠状病毒刺突糖蛋白S基因的分子分析
Virus Res. 2005 Mar;108(1-2):207-12. doi: 10.1016/j.virusres.2004.07.003.
3
Characterization of the nonstructural and spike proteins of the human respiratory coronavirus OC43: comparison with bovine enteric coronavirus.人呼吸道冠状病毒OC43非结构蛋白和刺突蛋白的特性：与牛肠道冠状病毒的比较
Adv Exp Med Biol. 1993;342:61-7. doi: 10.1007/978-1-4615-2996-5_10.
4
Nucleotide sequence and expression of the spike (S) gene of canine coronavirus and comparison with the S proteins of feline and porcine coronaviruses.犬冠状病毒刺突（S）基因的核苷酸序列、表达及其与猫冠状病毒和猪冠状病毒S蛋白的比较。
J Gen Virol. 1994 Jul;75 ( Pt 7):1789-94. doi: 10.1099/0022-1317-75-7-1789.
5
Comparison of the nucleotide and deduced amino acid sequences of the S genes specified by virulent and avirulent strains of bovine coronaviruses.牛冠状病毒强毒株和无毒株所指定的S基因的核苷酸序列与推导的氨基酸序列比较
Virology. 1991 Jul;183(1):397-404. doi: 10.1016/0042-6822(91)90154-4.
6
Temperature-sensitive acetylesterase activity of haemagglutinin-esterase specified by respiratory bovine coronaviruses.牛呼吸道冠状病毒所特有的血凝素酯酶的温度敏感性乙酰酯酶活性
J Med Microbiol. 2000 Dec;49(12):1119-1127. doi: 10.1099/0022-1317-49-12-1119.
7
Transmissible gastroenteritis virus and porcine respiratory coronavirus: molecular characterization of the S gene using cDNA probes and nucleotide sequence analysis.传染性胃肠炎病毒和猪呼吸道冠状病毒：利用cDNA探针和核苷酸序列分析对S基因进行分子特征分析
Adv Exp Med Biol. 1993;342:43-8. doi: 10.1007/978-1-4615-2996-5_7.
8
Molecular characterization of HE, M, and E genes of winter dysentery bovine coronavirus circulated in Korea during 2002-2003.2002 - 2003年在韩国流行的冬季痢疾牛冠状病毒的血凝素酯酶（HE）、膜蛋白（M）和包膜蛋白（E）基因的分子特征分析
Virus Genes. 2006 Apr;32(2):129-36. doi: 10.1007/s11262-005-6867-3.
9
10
The hemagglutinin/esterase glycoprotein of bovine coronaviruses: sequence and functional comparisons between virulent and avirulent strains.牛冠状病毒的血凝素/酯酶糖蛋白：强毒株与无毒株之间的序列和功能比较
Virology. 1991 Dec;185(2):847-52. doi: 10.1016/0042-6822(91)90557-r.
引用本文的文献
1
A comprehensive molecular analysis of bovine coronavirus strains isolated from Brazil and comparison of a wild-type and cell culture-adapted strain associated with respiratory disease.对巴西分离的牛冠状病毒株进行全面的分子分析，并比较与呼吸道疾病相关的野生型和细胞培养适应株。
Braz J Microbiol. 2024 Jun;55(2):1967-1977. doi: 10.1007/s42770-024-01287-0. Epub 2024 Feb 21.
2
Bovine coronavirus infections in Turkey: molecular analysis of the full-length spike gene sequences of viruses from digestive and respiratory infections.土耳其牛冠状病毒感染：来自消化道和呼吸道感染病毒全长刺突基因序列的分子分析。
Arch Virol. 2021 Sep;166(9):2461-2468. doi: 10.1007/s00705-021-05147-2. Epub 2021 Jul 1.
3
Bovine Coronavirus and the Associated Diseases.牛冠状病毒及相关疾病
Front Vet Sci. 2021 Mar 31;8:643220. doi: 10.3389/fvets.2021.643220. eCollection 2021.
4
New Insights Into the Physiopathology of COVID-19: SARS-CoV-2-Associated Gastrointestinal Illness.对COVID-19病理生理学的新见解：与SARS-CoV-2相关的胃肠道疾病
Front Med (Lausanne). 2021 Feb 18;8:640073. doi: 10.3389/fmed.2021.640073. eCollection 2021.
5
Comparative Pathogenesis of Bovine and Porcine Respiratory Coronaviruses in the Animal Host Species and SARS-CoV-2 in Humans.牛和猪呼吸道冠状病毒与人类 SARS-CoV-2 在动物宿主物种中的比较发病机制。
J Clin Microbiol. 2020 Jul 23;58(8). doi: 10.1128/JCM.01355-20.
6
Genomic Characterization and Phylogenetic Classification of Bovine Coronaviruses Through Whole Genome Sequence Analysis.通过全基因组序列分析对牛冠状病毒进行基因组特征分析和系统进化分类。
Viruses. 2020 Feb 6;12(2):183. doi: 10.3390/v12020183.
7
Genetic characterization of bovine coronavirus in Vietnam.越南牛冠状病毒的基因特征分析。
Virus Genes. 2019 Jun;55(3):415-420. doi: 10.1007/s11262-019-01647-1. Epub 2019 Feb 15.
8
Bovine-like coronaviruses in domestic and wild ruminants.家畜和野生反刍动物中的牛样冠状病毒。
Anim Health Res Rev. 2018 Dec;19(2):113-124. doi: 10.1017/S1466252318000117.
9
The detection and genetic characterization based on the S1 gene region of BCoVs from respiratory and enteric infections in Turkey.基于土耳其呼吸道和肠道感染中牛冠状病毒S1基因区域的检测及基因特征分析。
Transbound Emerg Dis. 2011 Apr;58(2):179-85. doi: 10.1111/j.1865-1682.2010.01194.x. Epub 2011 Jan 5.
10
Detection and molecular characterisation of bovine corona and toroviruses from Croatian cattle.克罗地亚牛群中牛冠状病毒和环曲病毒的检测及分子特征分析
BMC Vet Res. 2015 Aug 13;11:202. doi: 10.1186/s12917-015-0511-9.
本文引用的文献
1
The molecular biology of coronaviruses.冠状病毒的分子生物学
Adv Virus Res. 1997;48:1-100. doi: 10.1016/S0065-3527(08)60286-9.
2
Point mutations in the S protein connect the sialic acid binding activity with the enteropathogenicity of transmissible gastroenteritis coronavirus.S蛋白中的点突变将唾液酸结合活性与传染性胃肠炎冠状病毒的肠道致病性联系起来。
J Virol. 1997 Apr;71(4):3285-7. doi: 10.1128/JVI.71.4.3285-3287.1997.
3
Two amino acid changes at the N-terminus of transmissible gastroenteritis coronavirus spike protein result in the loss of enteric tropism.传染性胃肠炎冠状病毒刺突蛋白N端的两个氨基酸变化导致肠道嗜性丧失。
Virology. 1997 Jan 20;227(2):378-88. doi: 10.1006/viro.1996.8344.
4
Functional domains in the spike protein of transmissible gastroenteritis virus.传染性胃肠炎病毒刺突蛋白中的功能结构域。
Adv Exp Med Biol. 1995;380:299-304. doi: 10.1007/978-1-4615-1899-0_48.
5
The region between the M and S genes of porcine haemagglutinating encephalomyelitis virus is highly similar to human coronavirus OC43.猪血凝性脑脊髓炎病毒M基因和S基因之间的区域与人类冠状病毒OC43高度相似。
J Gen Virol. 1996 Jul;77 ( Pt 7):1443-7. doi: 10.1099/0022-1317-77-7-1443.
6
Coronavirus isolation from nasal swab samples in cattle with signs of respiratory tract disease after shipping.在运输后出现呼吸道疾病症状的牛的鼻拭子样本中分离出冠状病毒。
J Am Vet Med Assoc. 1996 May 1;208(9):1452-5.
7
The UCUAAAC promoter motif is not required for high-frequency leader recombination in bovine coronavirus defective interfering RNA.在牛冠状病毒缺陷干扰RNA中，高频前导序列重组不需要UCUAAAC启动子基序。
J Virol. 1996 May;70(5):2720-9. doi: 10.1128/JVI.70.5.2720-2729.1996.
8
Molecular characterization of the S protein gene of human coronavirus OC43.人冠状病毒OC43 S蛋白基因的分子特征分析
J Gen Virol. 1993 Sep;74 ( Pt 9):1981-7. doi: 10.1099/0022-1317-74-9-1981.
9
Leader-mRNA junction sequences are unique for each subgenomic mRNA species in the bovine coronavirus and remain so throughout persistent infection.在牛冠状病毒中，前导mRNA连接序列对于每个亚基因组mRNA种类而言都是独特的，并且在持续感染过程中一直保持如此。
Virology. 1993 Sep;196(1):163-71. doi: 10.1006/viro.1993.1464.
10
Characterization of the nonstructural and spike proteins of the human respiratory coronavirus OC43: comparison with bovine enteric coronavirus.人呼吸道冠状病毒OC43非结构蛋白和刺突蛋白的特性：与牛肠道冠状病毒的比较
Adv Exp Med Biol. 1993;342:61-7. doi: 10.1007/978-1-4615-2996-5_10.
Zotero 插件