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通过对半胱氨酸-38进行定点诱变研究大肠杆菌L-苏氨酸脱氢酶中的催化锌结合位点。

Investigation of a catalytic zinc binding site in Escherichia coli L-threonine dehydrogenase by site-directed mutagenesis of cysteine-38.

作者信息

Johnson A R, Chen Y W, Dekker E E

机构信息

Department of Biological Chemistry, University of Michigan, Ann Arbor, Michigan, 48109, USA.

出版信息

Arch Biochem Biophys. 1998 Oct 15;358(2):211-21. doi: 10.1006/abbi.1998.0845.

Abstract

L-Threonine dehydrogenase catalyzes the NAD+-dependent oxidation of threonine forming 2-amino-3-ketobutyrate. Chemical modification of Cys-38 of Escherichia coli threonine dehydrogenase, whose residue aligns with the catalytic zinc-binding residue, Cys-46, of related alcohol/polyol dehydrogenases, inactivates the enzyme [B. R. Epperly and E. E. Dekker (1991) J. Biol. Chem. 266, 6086-6092; A. R. Johnson and E. E. Dekker (1996) Protein Sci., 382-390]. To probe its function, Cys-38 was changed to Ser, Asp, and Glu by site-directed mutagenesis. Mutants C38S and C38D were purified to homogeneity and found to be, like the wild-type enzyme, homotetrameric proteins containing one Zn2+ atom per subunit. The circular dichroism spectra of these mutants were essentially identical to that of the wild-type enzyme. Mutant C38S was catalytically inactive but mutant C38D had a specific activity of 0.2 unit/mg, a level approximately 1% that of the wild-type enzyme. After it was incubated with 1 mM Zn2+ and then assayed in the presence of 15 mM Zn2+, mutant C38S showed only a trace of enzymatic activity (i.e., 0.013 unit/mg). Preincubation of mutant C38D with 5 mM Zn2+, Co2+, or Cd2+ increased its activity 57-, 6-, or 3-fold, respectively; 1 mM Mn2+ halved and 0.5 mM Hg2+ abolished activity. Zn2+-stimulated mutant C38D showed these properties: apparent substrate activation at low threonine concentrations, a maximum activity of 27 units/mg with 20 mM threonine, and inhibition by high levels of substrate; an activation Kd = 3 mM Zn2+; and a pH optimum of 8.4 (in contrast to pH 10.3 for the wild-type enzyme). Without added Zn2+, mutant C38D is equally active with threonine and 2-amino-3-hydroxypentanoate, but Zn2+-activated mutant C38D is 10-fold more reactive with threonine than with 2-amino-3-hydroxypentanoate. In the absence of added metal ions, wild-type enzyme similarly uses substrates other than threonine and shows a dramatic increase in activity with only threonine when stimulated by either Cd2+ or Mn2+; added Zn2+ has no effect on activity with threonine. Cys-38 of threonine dehydrogenase, therefore, is located in an activating divalent metal ion-binding site. Having a negatively charged residue like Asp in this position allows the binding of a catalytic Zn2+ ion which enhances activity with threonine and reduces activity with substrate analogs. Whether Cys-38 of wild-type threonine dehydrogenase binds a catalytic metal ion (possibly Zn2+) in vivo remains to be established.

摘要

L-苏氨酸脱氢酶催化苏氨酸的NAD⁺依赖性氧化反应,生成2-氨基-3-酮丁酸。大肠杆菌苏氨酸脱氢酶的半胱氨酸-38(Cys-38)的化学修饰会使该酶失活,其残基与相关醇/多元醇脱氢酶的催化锌结合残基半胱氨酸-46(Cys-46)对齐[B. R. 埃珀利和E. E. 德克尔(1991年)《生物化学杂志》266卷,6086 - 6092页;A. R. 约翰逊和E. E. 德克尔(1996年)《蛋白质科学》,382 - 390页]。为了探究其功能,通过定点诱变将Cys-38分别突变为丝氨酸(Ser)、天冬氨酸(Asp)和谷氨酸(Glu)。突变体C38S和C38D被纯化至同质,发现它们与野生型酶一样,是每个亚基含有一个Zn²⁺原子的同四聚体蛋白。这些突变体的圆二色光谱与野生型酶的基本相同。突变体C38S无催化活性,但突变体C38D的比活性为0.2单位/毫克,约为野生型酶的1%水平。在与1 mM Zn²⁺一起孵育,然后在15 mM Zn²⁺存在下进行测定时,突变体C38S仅显示出微量酶活性(即0.013单位/毫克)。用5 mM Zn²⁺、Co²⁺或Cd²⁺对突变体C38D进行预孵育,分别使其活性提高57倍、6倍或3倍;1 mM Mn²⁺使活性减半而0.5 mM Hg²⁺使活性丧失殆尽。锌刺激的突变体C38D表现出这些特性:在低苏氨酸浓度下有明显的底物激活作用,在20 mM苏氨酸时最大活性为27单位/毫克,并受到高浓度底物的抑制;激活解离常数(Kd) = 3 mM Zn²⁺;最适pH为8.4(与野生型酶的pH 10.3相反)。在不添加Zn²⁺时,突变体C38D对苏氨酸和2-氨基-3-羟基戊酸的活性相同,但锌激活的突变体C38D对苏氨酸的反应性比对2-氨基-3-羟基戊酸高10倍。在不添加金属离子的情况下,野生型酶同样使用苏氨酸以外的底物,并在受到Cd²⁺或Mn²⁺刺激时,仅对苏氨酸的活性有显著增加;添加Zn²⁺对其对苏氨酸的活性无影响。因此,苏氨酸脱氢酶的Cys-38位于一个激活二价金属离子结合位点。在该位置具有像天冬氨酸这样带负电荷的残基,允许结合催化性Zn²⁺离子,这增强了对苏氨酸的活性并降低了对底物类似物的活性。野生型苏氨酸脱氢酶的Cys-38在体内是否结合催化性金属离子(可能是Zn²⁺)仍有待确定。

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