Focia P J, Craig S P, Nieves-Alicea R, Fletterick R J, Eakin A E
Laboratory of Molecular Parasitology & Drug Design, School of Pharmacy, University of North Carolina, Chapel Hill 27599-7360, USA.
Biochemistry. 1998 Oct 27;37(43):15066-75. doi: 10.1021/bi981052s.
The hypoxanthine phosphoribosyltransferase (HPRT) from Trypanosoma cruzi, etiologic agent of Chagas' disease, was cocrystallized with the inosine analogue Formycin B (FmB) and the structure determined to 1.4 A resolution. This is the highest resolution structure yet reported for a phosphoribosyltransferase (PRT), and the asymmetric unit of the crystal contains a dimer of closely associated, nearly identical subunits. A conserved nonproline cis peptide in one active-site loop exposes the main-chain nitrogen to the enzyme active site, while the adjacent lysine side chain interacts with the other subunit of the dimer, thereby providing a possible mechanism for communication between the subunits and their active sites. The three-dimensional coordinates for the invariant Ser103-Tyr104 dipeptide are reported here for the first time. These are the only highly conserved residues in a second active-site loop, termed the long flexible loop, which is predicted to close over the active site of HPRTs to protect a labile transition state [Eads et al. (1994) Cell 78, 325-334]. This structure represents a major step forward in efforts to design/discover potent selective inhibitors of the HPRT of T. cruzi.
恰加斯病的病原体克氏锥虫的次黄嘌呤磷酸核糖转移酶(HPRT)与肌苷类似物间型霉素B(FmB)共结晶,其结构分辨率达到1.4埃。这是迄今报道的磷酸核糖转移酶(PRT)的最高分辨率结构,晶体的不对称单元包含紧密相连、近乎相同的亚基二聚体。一个活性位点环中的保守非脯氨酸顺式肽段将主链氮暴露于酶活性位点,而相邻的赖氨酸侧链与二聚体的另一个亚基相互作用,从而为亚基及其活性位点之间的通讯提供了一种可能的机制。不变的Ser103-Tyr104二肽的三维坐标在此首次报道。这些是第二个活性位点环(称为长柔性环)中仅有的高度保守残基,预计该环会在HPRT的活性位点上方闭合,以保护不稳定的过渡态[伊兹等人(1994年)《细胞》78卷,325 - 334页]。该结构代表了在设计/发现克氏锥虫HPRT有效选择性抑制剂方面向前迈出的重要一步。