• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

木糖氧化产碱杆菌GIFU 1051蓝色亚硝酸还原酶在2.05埃分辨率下的1型铜结构:蓝色和绿色亚硝酸还原酶的比较

Type 1 Cu structure of blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 A resolution: comparison of blue and green nitrite reductases.

作者信息

Inoue T, Gotowda M, Kataoka K, Yamaguchi K, Suzuki S, Watanabe H, Gohow M, Kai Y

机构信息

Department of Materials Chemistry, Graduate School of Engineering, Osaka University, Suita, Osaka, 565-0871, Japan.

出版信息

J Biochem. 1998 Nov;124(5):876-9. doi: 10.1093/oxfordjournals.jbchem.a022201.

DOI:10.1093/oxfordjournals.jbchem.a022201
PMID:9792907
Abstract

The crystal structure of the blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 (AxgNIR) has been determined at 2.05 A resolution. AxgNIR contains both type 1 and 2 Cu sites, the geometry of the former being distorted tetrahedral. The superpositioning of the type 1 Cu sites in the blue enzyme and a green nitrite reductase revealed that the orientation of the Met150 side chain differed. The deviation of the Sdelta(Met150) atom from the axial position of the NNS plane formed by two Ndelta(His95 and His145) and one Sgamma(Cys136) atom caused the difference in the colors of the enzymes, i.e. blue and green.

摘要

嗜木产碱菌GIFU 1051(AxgNIR)蓝色亚硝酸还原酶的晶体结构已在2.05埃分辨率下测定。AxgNIR同时含有1型和2型铜位点,前者的几何结构为扭曲的四面体。蓝色酶和绿色亚硝酸还原酶中1型铜位点的叠加显示,Met150侧链的取向不同。Met150的Sδ原子偏离由两个Nδ(His95和His145)和一个Sγ(Cys136)原子形成的NNS平面的轴向位置,导致了酶颜色的差异,即蓝色和绿色。

相似文献

1
Type 1 Cu structure of blue nitrite reductase from Alcaligenes xylosoxidans GIFU 1051 at 2.05 A resolution: comparison of blue and green nitrite reductases.木糖氧化产碱杆菌GIFU 1051蓝色亚硝酸还原酶在2.05埃分辨率下的1型铜结构:蓝色和绿色亚硝酸还原酶的比较
J Biochem. 1998 Nov;124(5):876-9. doi: 10.1093/oxfordjournals.jbchem.a022201.
2
X-ray structure of a blue copper nitrite reductase at high pH and in copper-free form at 1.9 A resolution.蓝色铜亚硝酸还原酶在高pH值及无铜形式下1.9埃分辨率的X射线结构。
Acta Crystallogr D Biol Crystallogr. 2001 Aug;57(Pt 8):1110-8. doi: 10.1107/s0907444901008654. Epub 2001 Jul 23.
3
X-ray structure of a blue-copper nitrite reductase in two crystal forms. The nature of the copper sites, mode of substrate binding and recognition by redox partner.两种晶体形式的蓝色铜亚硝酸还原酶的X射线结构。铜位点的性质、底物结合模式以及氧化还原伴侣的识别。
J Mol Biol. 1998 Sep 18;282(2):369-82. doi: 10.1006/jmbi.1998.2007.
4
The covalent structure of the blue copper-containing nitrite reductase from Achromobacter xylosoxidans.木糖氧化无色杆菌含蓝色铜亚硝酸还原酶的共价结构。
Biochem Biophys Res Commun. 1998 Jun 29;247(3):734-40. doi: 10.1006/bbrc.1998.8847.
5
Intersite structural rearrangement of the blue copper site induced by substrate binding: spectroscopic studies of a copper-containing nitrite reductase from Alcaligenes xylosoxidans NCIMB 11015.底物结合诱导蓝色铜位点的位点间结构重排:木糖氧化产碱杆菌NCIMB 11015含铜亚硝酸还原酶的光谱研究
Inorg Chem. 2006 Oct 16;45(21):8474-6. doi: 10.1021/ic0609195.
6
Alcaligenes xylosoxidans dissimilatory nitrite reductase: alanine substitution of the surface-exposed histidine 139l ligand of the type 1 copper center prevents electron transfer to the catalytic center.木糖氧化产碱杆菌异化亚硝酸盐还原酶:1型铜中心表面暴露的组氨酸139l配体的丙氨酸取代阻止电子传递至催化中心。
Biochemistry. 2002 Mar 12;41(10):3430-8. doi: 10.1021/bi011955c.
7
X-ray structure and site-directed mutagenesis of a nitrite reductase from Alcaligenes faecalis S-6: roles of two copper atoms in nitrite reduction.粪产碱菌S-6亚硝酸盐还原酶的X射线结构与定点诱变:两个铜原子在亚硝酸盐还原中的作用
Biochemistry. 1994 May 3;33(17):5246-52. doi: 10.1021/bi00183a030.
8
Proton-coupled electron transfer in the catalytic cycle of Alcaligenes xylosoxidans copper-dependent nitrite reductase.产碱杆菌依赖铜的亚硝酸盐还原酶催化循环中的质子偶联电子转移。
Biochemistry. 2011 May 17;50(19):4121-31. doi: 10.1021/bi200246f. Epub 2011 Apr 19.
9
The 2.3 angstrom X-ray structure of nitrite reductase from Achromobacter cycloclastes.环裂无色杆菌亚硝酸还原酶的2.3埃X射线结构。
Science. 1991 Jul 26;253(5018):438-42. doi: 10.1126/science.1862344.
10
Characterization of two type 1 Cu sites of Hyphomicrobium denitrificans nitrite reductase: a new class of copper-containing nitrite reductases.脱氮生丝微菌亚硝酸还原酶两个1型铜位点的表征:一类新型含铜亚硝酸还原酶
Biochemistry. 2004 Nov 9;43(44):14180-8. doi: 10.1021/bi0492657.

引用本文的文献

1
Beyond the coupled distortion model: structural analysis of the single domain cupredoxin AcoP, a green mononuclear copper centre with original features.超越耦合变形模型:单域杯状蛋白 AcoP 的结构分析,一种具有原始特征的绿色单核铜中心。
Dalton Trans. 2024 Jan 23;53(4):1794-1808. doi: 10.1039/d3dt03372d.
2
High-resolution neutron crystallography visualizes an OH-bound resting state of a copper-containing nitrite reductase.高分辨率中子晶体学可视化了含铜亚硝酸盐还原酶的一个 OH 键结合的静息态。
Proc Natl Acad Sci U S A. 2020 Feb 25;117(8):4071-4077. doi: 10.1073/pnas.1918125117. Epub 2020 Feb 10.
3
Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography.
通过飞秒晶体学和微聚焦晶体学联用揭示亚硝酸还原酶中氧化还原偶联的结构变化
J Biochem. 2016 May;159(5):527-38. doi: 10.1093/jb/mvv133. Epub 2016 Jan 14.
4
Pseudoazurin from Sinorhizobium meliloti as an electron donor to copper-containing nitrite reductase: influence of the redox partner on the reduction potentials of the enzyme copper centers.来自苜蓿中华根瘤菌的假天青蛋白作为含铜亚硝酸还原酶的电子供体:氧化还原伙伴对酶铜中心还原电位的影响。
J Biol Inorg Chem. 2014 Aug;19(6):913-21. doi: 10.1007/s00775-014-1124-7. Epub 2014 Mar 20.
5
Refined distances between paramagnetic centers of a multi-copper nitrite reductase determined by pulsed EPR (iDEER) spectroscopy.通过脉冲电子顺磁共振(iDEER)光谱法测定的多铜亚硝酸还原酶顺磁中心之间的精确距离。
Angew Chem Int Ed Engl. 2013 Feb 11;52(7):1990-3. doi: 10.1002/anie.201208166. Epub 2013 Jan 7.
6
Expression, and molecular and enzymatic characterization of Cu-containing nitrite reductase from a marine ammonia-oxidizing gammaproteobacterium, Nitrosococcus oceani.海洋氨氧化γ-变形菌海洋硝化球菌含铜亚硝酸盐还原酶的表达、分子特征和酶学特性。
Microbes Environ. 2012;27(4):407-12. doi: 10.1264/jsme2.me11310. Epub 2012 Apr 28.
7
Crystal structure of a two-domain multicopper oxidase: implications for the evolution of multicopper blue proteins.双结构域多铜氧化酶的晶体结构:对多铜蓝蛋白进化的启示
J Biol Chem. 2009 Apr 10;284(15):10174-80. doi: 10.1074/jbc.M900179200. Epub 2009 Feb 17.
8
Expression, purification, crystallization and preliminary X-ray diffraction analysis of the soluble domain of PPA0092, a putative nitrite reductase from Propionibacterium acnes.痤疮丙酸杆菌中一种假定的亚硝酸还原酶PPA0092可溶性结构域的表达、纯化、结晶及初步X射线衍射分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Feb 1;65(Pt 2):123-7. doi: 10.1107/S1744309108040207. Epub 2009 Jan 7.
9
Crystallization and preliminary X-ray diffraction analysis of a complex between the electron-transfer partners hexameric Cu-containing nitrite reductase and pseudoazurin.电子传递伙伴六聚体含铜亚硝酸还原酶与假单胞菌素之间复合物的结晶及初步X射线衍射分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Feb 1;65(Pt 2):116-9. doi: 10.1107/S1744309108040219. Epub 2009 Jan 7.
10
Structure and function of a hexameric copper-containing nitrite reductase.一种含铜六聚亚硝酸还原酶的结构与功能
Proc Natl Acad Sci U S A. 2007 Mar 13;104(11):4315-20. doi: 10.1073/pnas.0609195104. Epub 2007 Mar 5.