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质子转运型转氢酶重组结构域介导的核苷酸间氢化物转移的停流动力学

Stopped-flow kinetics of hydride transfer between nucleotides by recombinant domains of proton-translocating transhydrogenase.

作者信息

Venning J D, Bizouarn T, Cotton N P, Quirk P G, Jackson J B

机构信息

School of Biochemistry, University of Birmingham, Edgbaston, UK.

出版信息

Eur J Biochem. 1998 Oct 1;257(1):202-9. doi: 10.1046/j.1432-1327.1998.2570202.x.

DOI:10.1046/j.1432-1327.1998.2570202.x
PMID:9799120
Abstract

Transhydrogenase catalyses the transfer of reducing equivalents between NAD(H) and NADP(H) coupled to proton translocation across the membranes of bacteria and mitochondria. The protein has a tridomain structure. Domains I and III protrude from the membrane (e.g. on the cytoplasmic side in bacteria) and domain II spans the membrane. Domain I has the binding site for NAD+/NADH, and domain III for NADP+/NADPH. We have separately purified recombinant forms of domains I and III from Rhodospirillum rubrum transhydrogenase. When the two recombinant proteins were mixed with substrates in the stopped-flow spectrophotometer, there was a biphasic burst of hydride transfer from NADPH to the NAD+ analogue, acetylpyridine adenine dinucleotide (AcPdAD+). The burst, corresponding to a single turnover of domain III, precedes the onset of steady state, which is limited by very slow release of product NADP+ (k approximately 0.03 s(-1)). Phase A of the burst (k approximately 600 s(-1)) probably arises from fast hydride transfer in complexes of domains I and III. Phase B (k approximately 10-50 s(-1)), which predominates when the concentration of domain I is less than that of domain III, probably results from dissociation of the domain I:III complexes and further association and turnover of domain I. Phases A and B were only weakly dependent on pH, and it is therefore unlikely that either the hydride transfer reaction, or conformational changes accompanying dissociation of the I:III complex, are directly coupled to proton binding or release. A comparison of the temperature dependences of AcPdAD+ reduction by [4B-2H]NADPH, and by [4B-1H]NADPH, during phase A shows that there may be a contribution from quantum mechanical tunnelling to the process of hydride transfer. Given that hydride transfer between the nucleotides is direct [Venning, J. D., Grimley, R. L., Bizouarn, T., Cotton, N. P. J. & Jackson, J. B. (1997) J. Biol. Chem. 272, 27535-27538], this suggests very close proximity of the nicotinamide rings of the two nucleotides in the I:III complex.

摘要

转氢酶催化还原当量在NAD(H)和NADP(H)之间的转移,此过程与质子跨细菌和线粒体膜的转运相偶联。该蛋白质具有三结构域结构。结构域I和III从膜上突出(如在细菌的细胞质一侧),结构域II跨膜。结构域I有NAD+/NADH的结合位点,结构域III有NADP+/NADPH的结合位点。我们已分别从红螺菌转氢酶中纯化出结构域I和III的重组形式。当将这两种重组蛋白与底物在停流分光光度计中混合时,从NADPH到NAD+类似物乙酰吡啶腺嘌呤二核苷酸(AcPdAD+)有一个双相的氢化物转移猝发。对应于结构域III单次周转的猝发,先于稳态的开始,稳态受产物NADP+非常缓慢的释放(k约为0.03 s-1)限制。猝发的A相(k约为600 s-1)可能源于结构域I和III复合物中快速的氢化物转移。B相(k约为10 - 50 s-1),当结构域I的浓度低于结构域III时占主导,可能是由于结构域I:III复合物的解离以及结构域I的进一步缔合和周转导致的。A相和B相仅对pH有微弱依赖性,因此氢化物转移反应或伴随I:III复合物解离的构象变化不太可能直接与质子结合或释放相偶联。在A相期间,对[4B - 2H]NADPH和[4B - 1H]NADPH还原AcPdAD+的温度依赖性进行比较表明,量子力学隧穿可能对氢化物转移过程有贡献。鉴于核苷酸之间的氢化物转移是直接的[Venning, J. D., Grimley, R. L., Bizouarn, T., Cotton, N. P. J. & Jackson, J. B. (1997) J. Biol. Chem. 272, 27535 - 27538],这表明在I:III复合物中两个核苷酸的烟酰胺环非常接近。

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