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用于研究必需基因功能的N-端规则蛋白降解策略:酵母提取物中核苷酸切除修复对复制蛋白A和增殖细胞核抗原蛋白的需求

The N-degron protein degradation strategy for investigating the function of essential genes: requirement for replication protein A and proliferating cell nuclear antigen proteins for nucleotide excision repair in yeast extracts.

作者信息

Huang W, Feaver W J, Tomkinson A E, Friedberg E C

机构信息

Department of Pathology, University of Texas, Southwestern Medical Center, Dallas 75235-9072, USA.

出版信息

Mutat Res. 1998 Sep 11;408(3):183-94. doi: 10.1016/s0921-8777(98)00031-7.

DOI:10.1016/s0921-8777(98)00031-7
PMID:9806417
Abstract

Nucleotide excision repair (NER) of DNA in the yeast Saccharomyces cerevisiae and in human cells has been shown to be a biochemically complex process involving multiple gene products. In yeast, the involvement of the DNA replication accessory proteins, replication protein A (RPA1) and proliferating cell nuclear antigen (PCNA) in NER has not been demonstrated genetically. In this study we have generated temperature-degradable rfa1 and pcna mutants and show that these mutants are defective in NER in vitro under conditions that promote degradation of the RFA1 and PCNA gene products. We also demonstrate a physical interaction between RPA1 protein and subunits of the RNA polymerase II basal transcription factor IIH (TFIIH).

摘要

在酿酒酵母和人类细胞中,DNA的核苷酸切除修复(NER)已被证明是一个涉及多种基因产物的生物化学复杂过程。在酵母中,DNA复制辅助蛋白复制蛋白A(RPA1)和增殖细胞核抗原(PCNA)参与核苷酸切除修复尚未得到遗传学证明。在本研究中,我们构建了温度可降解的rfa1和pcna突变体,并表明在促进RFA1和PCNA基因产物降解的条件下,这些突变体在体外核苷酸切除修复中存在缺陷。我们还证明了RPA1蛋白与RNA聚合酶II基础转录因子IIH(TFIIH)亚基之间存在物理相互作用。

相似文献

1
The N-degron protein degradation strategy for investigating the function of essential genes: requirement for replication protein A and proliferating cell nuclear antigen proteins for nucleotide excision repair in yeast extracts.用于研究必需基因功能的N-端规则蛋白降解策略:酵母提取物中核苷酸切除修复对复制蛋白A和增殖细胞核抗原蛋白的需求
Mutat Res. 1998 Sep 11;408(3):183-94. doi: 10.1016/s0921-8777(98)00031-7.
2
The yeast TFB1 and SSL1 genes, which encode subunits of transcription factor IIH, are required for nucleotide excision repair and RNA polymerase II transcription.酵母的TFB1和SSL1基因编码转录因子IIH的亚基,核苷酸切除修复和RNA聚合酶II转录需要这两个基因。
Mol Cell Biol. 1995 Apr;15(4):2288-93. doi: 10.1128/MCB.15.4.2288.
3
Transcription factor b (TFIIH) is required during nucleotide-excision repair in yeast.转录因子b(TFIIH)在酵母的核苷酸切除修复过程中是必需的。
Nature. 1994 Mar 3;368(6466):74-6. doi: 10.1038/368074a0.
4
Reconstitution of yeast nucleotide excision repair with purified Rad proteins, replication protein A, and transcription factor TFIIH.用纯化的Rad蛋白、复制蛋白A和转录因子TFIIH重建酵母核苷酸切除修复。
J Biol Chem. 1995 Jun 2;270(22):12973-6. doi: 10.1074/jbc.270.22.12973.
5
A yeast whole cell extract supports nucleotide excision repair and RNA polymerase II transcription in vitro.酵母全细胞提取物在体外支持核苷酸切除修复和RNA聚合酶II转录。
Mutat Res. 1996 Sep 2;364(1):33-41. doi: 10.1016/0921-8777(96)00019-5.
6
Defective Kin28, a subunit of yeast TFIIH, impairs transcription-coupled but not global genome nucleotide excision repair.酵母TFIIH的一个亚基Kin28存在缺陷,会损害转录偶联的核苷酸切除修复,但不会损害全基因组核苷酸切除修复。
Mutat Res. 1998 Dec 14;409(3):181-8. doi: 10.1016/s0921-8777(98)00060-3.
7
Yeast RNA polymerase II transcription in vitro is inhibited in the presence of nucleotide excision repair: complementation of inhibition by Holo-TFIIH and requirement for RAD26.在核苷酸切除修复存在的情况下,体外酵母RNA聚合酶II转录受到抑制:全酶TFIIH对抑制作用的互补及RAD26的需求。
Mol Cell Biol. 1998 May;18(5):2668-76. doi: 10.1128/MCB.18.5.2668.
8
DNA repair deficiencies associated with mutations in genes encoding subunits of transcription initiation factor TFIIH in yeast.酵母中与编码转录起始因子TFIIH亚基的基因突变相关的DNA修复缺陷。
Nucleic Acids Res. 1996 Apr 15;24(8):1540-6. doi: 10.1093/nar/24.8.1540.
9
Transcription factor TFIIH and DNA endonuclease Rad2 constitute yeast nucleotide excision repair factor 3: implications for nucleotide excision repair and Cockayne syndrome.转录因子TFIIH和DNA内切酶Rad2构成酵母核苷酸切除修复因子3:对核苷酸切除修复和科凯恩综合征的影响。
Proc Natl Acad Sci U S A. 1996 Oct 1;93(20):10718-22. doi: 10.1073/pnas.93.20.10718.
10
Analysis of gene- and strand-specific repair in the moderately UV-sensitive Saccharomyces cerevisiae rad23 mutant.中度紫外线敏感的酿酒酵母rad23突变体中基因和链特异性修复的分析。
Mutat Res. 1996 Feb 15;362(2):155-65. doi: 10.1016/0921-8777(95)00045-3.

引用本文的文献

1
DNA repair mechanisms and the bypass of DNA damage in Saccharomyces cerevisiae.酵母中 DNA 修复机制和 DNA 损伤的绕过。
Genetics. 2013 Apr;193(4):1025-64. doi: 10.1534/genetics.112.145219.
2
Setting of graded levels of a protein in yeast by a t-degron technique as applied to phosphoglycerate mutase.通过应用于磷酸甘油酸变位酶的t-降解子技术在酵母中设置蛋白质的分级水平。
BMC Genet. 2002 Jul 30;3:13. doi: 10.1186/1471-2156-3-13.
3
Accessibility of DNA polymerases to repair synthesis during nucleotide excision repair in yeast cell-free extracts.
酵母无细胞提取物中核苷酸切除修复过程中DNA聚合酶进行修复合成的可及性。
Nucleic Acids Res. 2001 Jul 15;29(14):3123-30. doi: 10.1093/nar/29.14.3123.
4
The 19S complex of the proteasome regulates nucleotide excision repair in yeast.蛋白酶体的19S复合物在酵母中调节核苷酸切除修复。
Genes Dev. 2001 Jun 15;15(12):1528-39. doi: 10.1101/gad.869601.
5
DNA replication but not nucleotide excision repair is required for UVC-induced replication protein A phosphorylation in mammalian cells.哺乳动物细胞中,UVC诱导的复制蛋白A磷酸化需要DNA复制,但不需要核苷酸切除修复。
Mol Cell Biol. 2000 Apr;20(8):2696-705. doi: 10.1128/MCB.20.8.2696-2705.2000.
6
Yeast autonomously replicating sequence binding factor is involved in nucleotide excision repair.酵母自主复制序列结合因子参与核苷酸切除修复。
Genes Dev. 1999 Dec 1;13(23):3052-8. doi: 10.1101/gad.13.23.3052.