Pardanani A, Gambacurta A, Ascoli F, Royer W E
Program in Molecular Medicine, University of Massachusetts Medical Center, Worcester, MA, 01655, USA.
J Mol Biol. 1998 Dec 4;284(3):729-39. doi: 10.1006/jmbi.1998.2195.
A cluster of interface ordered water molecules has been proposed to act as a key mediator of intersubunit communication in the homodimeric hemoglobin of Scapharca inaequivalvis. Mutations of Thr72 to Val and Ile, which lack the hydroxyl group to hydrogen bond the deoxy interface water molecules, result in sharply altered functional properties. We have determined the high resolution (1.6-1. 8 A) crystal structures of these two mutants in both the deoxygenated and CO-liganded states. These structures show minimal protein structural changes relative to the same native derivatives, despite greater than 40-fold increases in oxygen affinity. In the deoxy state of both mutants two water molecules at the periphery of the water cluster are lost, and the remaining cluster water molecules are destabilized. The CO-liganded structures show key differences between the two mutants including a more optimal interface packing involving Ile72 that acts to stabilize its high affinity (R) state. This additional stabilization allows rationalization of its lowered cooperativity within the context of a two-state model. These studies support a key role of ordered water in cooperative functioning and illustrate how subtle structural alterations can result in significantly altered functional properties in an allosteric molecule.
有人提出,在不等齿毛蚶的同二聚体血红蛋白中,一簇有序排列的水分子充当亚基间通讯的关键介质。苏氨酸72突变为缬氨酸和异亮氨酸后,由于缺乏羟基与脱氧界面水分子形成氢键,导致功能特性急剧改变。我们已经确定了这两个突变体在脱氧状态和一氧化碳配体状态下的高分辨率(1.6 - 1.8 Å)晶体结构。尽管氧亲和力增加了40多倍,但相对于相同的天然衍生物,这些结构显示出最小的蛋白质结构变化。在两个突变体的脱氧状态下,水分子簇外围的两个水分子丢失,其余的簇水分子不稳定。一氧化碳配体结构显示出两个突变体之间的关键差异,包括涉及异亮氨酸72的更优化的界面堆积,这有助于稳定其高亲和力(R)状态。这种额外的稳定性使得在双态模型的背景下能够合理地解释其降低的协同性。这些研究支持了有序水在协同功能中的关键作用,并说明了微妙的结构改变如何导致变构分子的功能特性发生显著变化。