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大肠杆菌的核酸外切酶IX可从DNA上去除3'磷酸乙醇酸末端基团。

Exonuclease IX of Escherichia coli removes 3' phosphoglycolate end groups from DNA.

作者信息

Sandigursky M, Franklin W A

机构信息

Department of Radiology, Albert Einstein College of Medicine, Bronx, New York 10461, USA.

出版信息

Radiat Res. 1998 Dec;150(6):609-11.

PMID:9840179
Abstract

The bacteria Escherichia coli contains several exonucleases acting on both double- and single-stranded DNA, and in both a 5'--> 3' and a 3' --> 5' direction. These enzymes are involved in replicative, repair and recombination functions. A new exonuclease recently identified in E. coli, termed exonuclease IX, acts preferentially on single-stranded DNA as a 3'--> 5' exonuclease and also functions as a 3' phosphodiesterase on DNA containing 3' incised apurinic/apyrimidinic (AP) sites to remove the product trans-4-hydroxy-2-pentenal-5-phosphate. We now demonstrate that the enzyme is also able to remove 3' phosphoglycolate end groups from DNA. This activity may have an important role in DNA base excision repair in E. coli.

摘要

大肠杆菌含有多种作用于双链和单链DNA的核酸外切酶,其作用方向既有5'→3',也有3'→5'。这些酶参与复制、修复和重组功能。最近在大肠杆菌中鉴定出一种新的核酸外切酶,称为核酸外切酶IX,它优先作为3'→5'核酸外切酶作用于单链DNA,并且还作为3'磷酸二酯酶作用于含有3'切口的无嘌呤/无嘧啶(AP)位点的DNA,以去除反式-4-羟基-2-戊烯醛-5-磷酸产物。我们现在证明该酶还能够从DNA中去除3'磷酸乙醇酸末端基团。这种活性可能在大肠杆菌的DNA碱基切除修复中起重要作用。

相似文献

1
Exonuclease IX of Escherichia coli removes 3' phosphoglycolate end groups from DNA.大肠杆菌的核酸外切酶IX可从DNA上去除3'磷酸乙醇酸末端基团。
Radiat Res. 1998 Dec;150(6):609-11.
2
Exonuclease I of Escherichia coli removes phosphoglycolate 3'-end groups from DNA.大肠杆菌的核酸外切酶 I 可去除 DNA 上的磷酸乙醇酸 3'-末端基团。
Radiat Res. 1993 Aug;135(2):229-33.
3
Exonuclease IX of Escherichia coli.大肠杆菌核酸外切酶IX
Nucleic Acids Res. 1998 Jun 1;26(11):2593-7. doi: 10.1093/nar/26.11.2593.
4
Excision of sugar-phosphate products at apurinic/apyrimidinic sites by DNA deoxyribophosphodiesterase of Escherichia coli.大肠杆菌DNA脱氧核糖磷酸二酯酶对脱嘌呤/脱嘧啶位点处糖磷酸产物的切除作用。
Radiat Res. 1992 Sep;131(3):332-7.
5
Purification, crystallization and space group determination of DNA repair enzyme exonuclease III from E. coli.大肠杆菌DNA修复酶外切核酸酶III的纯化、结晶及空间群测定
J Mol Biol. 1993 Jan 5;229(1):239-42. doi: 10.1006/jmbi.1993.1021.
6
Escherichia coli single-stranded DNA binding protein stimulates the DNA deoxyribophosphodiesterase activity of exonuclease I.大肠杆菌单链DNA结合蛋白刺激核酸外切酶I的DNA脱氧核糖磷酸二酯酶活性。
Nucleic Acids Res. 1994 Jan 25;22(2):247-50. doi: 10.1093/nar/22.2.247.
7
Protein-protein interactions between the Escherichia coli single-stranded DNA-binding protein and exonuclease I.大肠杆菌单链DNA结合蛋白与核酸外切酶I之间的蛋白质-蛋白质相互作用。
Radiat Res. 1996 May;145(5):619-23.
8
DNA deoxyribophosphodiesterase and an activity that cleaves DNA containing thymine glycol adducts in Deinococcus radiodurans.嗜放射栖热菌中的DNA脱氧核糖磷酸二酯酶以及一种可切割含有胸腺嘧啶乙二醇加合物的DNA的活性。
Radiat Res. 1994 May;138(2):282-5.
9
DNA deoxyribophosphodiesterase of Escherichia coli is associated with exonuclease I.大肠杆菌的DNA脱氧核糖磷酸二酯酶与核酸外切酶I相关。
Nucleic Acids Res. 1992 Sep 25;20(18):4699-703. doi: 10.1093/nar/20.18.4699.
10
Determinants in nuclease specificity of Ape1 and Ape2, human homologues of Escherichia coli exonuclease III.大肠杆菌核酸外切酶III的人类同源物Ape1和Ape2核酸酶特异性的决定因素。
J Mol Biol. 2002 Feb 22;316(3):853-66. doi: 10.1006/jmbi.2001.5382.

引用本文的文献

1
Molecular interactions of Escherichia coli ExoIX and identification of its associated 3'-5' exonuclease activity.大肠杆菌ExoIX的分子相互作用及其相关3'-5'核酸外切酶活性的鉴定。
Nucleic Acids Res. 2007;35(12):4094-102. doi: 10.1093/nar/gkm396. Epub 2007 Jun 12.
2
Role of 2-phosphoglycolate phosphatase of Escherichia coli in metabolism of the 2-phosphoglycolate formed in DNA repair.大肠杆菌2-磷酸乙醇酸磷酸酶在DNA修复过程中形成的2-磷酸乙醇酸代谢中的作用
J Bacteriol. 2003 Oct;185(19):5815-21. doi: 10.1128/JB.185.19.5815-5821.2003.