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通过分子建模预测与嘌呤部分相互作用的三个残基会改变环核苷酸门控通道中的配体结合和通道门控。

Three residues predicted by molecular modeling to interact with the purine moiety alter ligand binding and channel gating in cyclic nucleotide-gated channels.

作者信息

Scott S P, Tanaka J C

机构信息

Department of Pathology, School of Dental Medicine, University of Pennsylvania, Philadelphia 19104, USA.

出版信息

Biochemistry. 1998 Dec 8;37(49):17239-52. doi: 10.1021/bi981185d.

DOI:10.1021/bi981185d
PMID:9860838
Abstract

Cytoplasmic cAMP and cGMP are soluble cellular messengers that directly activate cyclic nucleotide-gated (CNG) channels. These channels mediate sensory transduction in photoreceptors and olfactory neurons. The closely related CNG channels in these cell types have different nucleotide activation profiles, and we have investigated the molecular basis of their nucleotide selectivity properties. Previously, we predicted that the purine moiety of the nucleotide interacts with residues F533, K596, and D604 (bovine rod alpha CNG channel subunit sequences) of the nucleotide binding domain. In this study, we replaced these three residues with the corresponding residues of the bovine olfactory CNG channel. Mutations at each position altered the nucleotide activation of the rod CNG channels. In a mutant where K596 was replaced with arginine, cAMP-activated currents were enhanced 8-12-fold, suggesting that residue 596 influences channel gating. Thermodynamic cycle analysis of the data showed that (1) the residues are energetically coupled and (2) energetic coupling exists between the potentiating effects of Ni2+ and the replacement of F533 with tyrosine. These data suggest that changes in one of the residues alter the purine contacts with the other residues and that F533 communicates with the C-linker region of the channel involved in Ni2+ potentiation.

摘要

细胞质中的环磷酸腺苷(cAMP)和环磷酸鸟苷(cGMP)是可溶的细胞信使,可直接激活环核苷酸门控(CNG)通道。这些通道介导光感受器和嗅觉神经元中的感觉转导。这些细胞类型中密切相关的CNG通道具有不同的核苷酸激活特征,我们已经研究了它们核苷酸选择性特性的分子基础。此前,我们预测核苷酸的嘌呤部分与核苷酸结合域的F533、K596和D604残基(牛视杆细胞α-CNG通道亚基序列)相互作用。在本研究中,我们将这三个残基替换为牛嗅觉CNG通道的相应残基。每个位置的突变都改变了视杆细胞CNG通道的核苷酸激活。在将K596替换为精氨酸的突变体中,cAMP激活的电流增强了8至12倍,表明596位残基影响通道门控。对数据的热力学循环分析表明:(1)这些残基在能量上是耦合的;(2)Ni2+的增强作用与用酪氨酸替换F533之间存在能量耦合。这些数据表明,一个残基的变化会改变嘌呤与其他残基的接触,并且F533与参与Ni2+增强作用的通道C-连接区进行通信。

相似文献

1
Three residues predicted by molecular modeling to interact with the purine moiety alter ligand binding and channel gating in cyclic nucleotide-gated channels.通过分子建模预测与嘌呤部分相互作用的三个残基会改变环核苷酸门控通道中的配体结合和通道门控。
Biochemistry. 1998 Dec 8;37(49):17239-52. doi: 10.1021/bi981185d.
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Three amino acids in the C-linker are major determinants of gating in cyclic nucleotide-gated channels.C连接子中的三个氨基酸是环核苷酸门控通道门控的主要决定因素。
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Coexpression of alpha and beta subunits of the rod cyclic GMP-gated channel restores native sensitivity to cyclic AMP: role of D604/N1201.视杆细胞环磷酸鸟苷门控通道α和β亚基的共表达可恢复对环磷酸腺苷的天然敏感性:D604/N1201的作用
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Altered ligand specificity by protonation in the ligand binding domain of cyclic nucleotide-gated channels.环核苷酸门控通道配体结合域中质子化导致配体特异性改变。
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Single cyclic nucleotide-gated channels locked in different ligand-bound states.锁定在不同配体结合状态的单环核苷酸门控通道。
Nature. 1997 Sep 25;389(6649):389-92. doi: 10.1038/38744.

引用本文的文献

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Structural and functional characterization of Caenorhabditis elegans cyclic GMP-activated channel TAX-4 via molecular dynamics simulations.通过分子动力学模拟对线虫环磷酸鸟苷激活通道TAX-4进行结构和功能表征。
Eur Biophys J. 2025 May 27. doi: 10.1007/s00249-025-01756-w.
2
Movement of the C-helix during the gating of cyclic nucleotide-gated channels.环核苷酸门控通道门控过程中C螺旋的运动
Biophys J. 2002 Dec;83(6):3283-95. doi: 10.1016/S0006-3495(02)75329-0.
3
Efficient coupling of ligand binding to channel opening by the binding domain of a modulatory (beta) subunit of the olfactory cyclic nucleotide-gated channel.
嗅觉环核苷酸门控通道调节性(β)亚基的结合结构域实现配体结合与通道开放的有效偶联。
J Gen Physiol. 2001 Nov;118(5):523-46. doi: 10.1085/jgp.118.5.523.
4
A point mutation in the pore region alters gating, Ca(2+) blockage, and permeation of olfactory cyclic nucleotide-gated channels.孔区的点突变会改变嗅觉环核苷酸门控通道的门控、Ca(2+) 阻断和通透。
J Gen Physiol. 2000 Sep;116(3):311-26. doi: 10.1085/jgp.116.3.311.
5
Mutating three residues in the bovine rod cyclic nucleotide-activated channel can switch a nucleotide from inactive to active.在牛视杆细胞环核苷酸激活通道中突变三个残基可使一种核苷酸从无活性转变为有活性。
Biophys J. 2000 May;78(5):2321-33. doi: 10.1016/S0006-3495(00)76778-6.