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关于极低分辨率下大分子相位问题的从头算解决方案。II. 基于广义似然的聚类判别方法。

On the ab initio solution of the phase problem or macromolecules at very low resolution. II. Generalized likelihood based approach to cluster discrimination.

作者信息

Lunin V Y, Lunina N L, Petrova T E, Urzhumtsev A G, Podjarny A D

机构信息

Institute of Mathematical Problems of Biology, Russian Academy of Sciences, Pushchino, Moscow Region, 142292, Russia.

出版信息

Acta Crystallogr D Biol Crystallogr. 1998 Sep 1;54(Pt 5):726-34. doi: 10.1107/s0907444997012456.

Abstract

The multisolution strategies for direct phasing at very low resolution, such as the few atoms model technique, result in a number of alternative phase sets, each of them arising from a cluster of closely related models. Use of a Monte-Carlo type computer procedure is suggested to choose between the possible phase sets. It consists of generating a large number of pseudo-atom models inside the mask defined by a trial phase set and the use of histograms of magnitude correlation to evaluate the masks. It is shown that the procedure may be considered as a generalization of the statistical maximum-likelihood principle and may be used as a powerful supplementary tool in the likelihood-based approaches to the phase problem solution.

摘要

用于极低分辨率下直接相位确定的多解策略,比如少数原子模型技术,会产生许多可供选择的相位集,其中每一个都源自一组紧密相关模型的聚类。建议使用蒙特卡洛类型的计算机程序在可能的相位集之间进行选择。该程序包括在由一个试验相位集定义的掩模内生成大量伪原子模型,并使用幅度相关性直方图来评估这些掩模。结果表明,该程序可被视为统计最大似然原理的推广,并且可以用作基于似然性的相位问题求解方法中的一种强大辅助工具。

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