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用于扫描力显微镜成像的超螺旋DNA在云母上的沉积。

Deposition of supercoiled DNA on mica for scanning force microscopy imaging.

作者信息

Samorì B, Muzzalupo I, Zuccheri G

机构信息

Dipartimento di Chimica, Università della Calabria, Cosenza, Italy.

出版信息

Scanning Microsc. 1996;10(4):953-60; discussion 960-2.

PMID:9890815
Abstract

The deposition of DNA molecules on mica is driven and controlled by the ionic densities around DNA and close to the surface of the substrate. Dramatic improvements in the efficiency and reproducibility of DNA depositions were due to the introduction of divalent cations in the deposition solutions. The ionic distributions on DNA and on mica determine the mobility of adsorbed DNA molecules, thus letting them assume thermodynamically equilibrated conformations, or alternatively trapping them in non-equilibrated conformations upon adsorption. With these prerequisites, mica does not seem like an inert substrate for DNA deposition for microscopy, and its properties greatly affect the efficiency of DNA deposition and the appearance of the molecules on the substrate. In our laboratory, we have some preliminary evidence that mica could also participate in DNA damage, most likely through its heavy metal impurities.

摘要

DNA分子在云母上的沉积受DNA周围以及靠近基底表面的离子密度驱动和控制。沉积溶液中引入二价阳离子使得DNA沉积的效率和可重复性有了显著提高。DNA和云母上的离子分布决定了吸附的DNA分子的迁移率,从而使其呈现热力学平衡构象,或者在吸附时将它们捕获在非平衡构象中。基于这些前提,云母对于用于显微镜观察的DNA沉积而言似乎并非惰性基底,其性质极大地影响了DNA沉积的效率以及分子在基底上的外观。在我们实验室,我们有一些初步证据表明云母也可能参与DNA损伤,最有可能是通过其重金属杂质。

相似文献

1
Deposition of supercoiled DNA on mica for scanning force microscopy imaging.用于扫描力显微镜成像的超螺旋DNA在云母上的沉积。
Scanning Microsc. 1996;10(4):953-60; discussion 960-2.
2
Electron and scanning force microscopy studies of alterations in supercoiled DNA tertiary structure.超螺旋DNA三级结构改变的电子显微镜和扫描力显微镜研究
J Mol Biol. 2001 Oct 19;313(2):295-307. doi: 10.1006/jmbi.2001.5031.
3
Scanning force microscopy of the complexes of p53 core domain with supercoiled DNA.p53核心结构域与超螺旋DNA复合物的扫描力显微镜观察
J Mol Biol. 2000 Jun 9;299(3):585-92. doi: 10.1006/jmbi.2000.3759.
4
Time-lapse imaging of conformational changes in supercoiled DNA by scanning force microscopy.通过扫描力显微镜对超螺旋DNA构象变化进行延时成像。
Anal Biochem. 2002 Jan 15;300(2):170-6. doi: 10.1006/abio.2001.5435.
5
[Compaction of single supercoiled DNA molecules adsorbed onto amino mica].[吸附在氨基云母上的单个超螺旋DNA分子的压缩]
Bioorg Khim. 2006 Sep-Oct;32(5):494-510.
6
Imaging compaction of single supercoiled DNA molecules by atomic force microscopy.利用原子力显微镜对单个超螺旋DNA分子进行成像压实
Gen Physiol Biophys. 2008 Dec;27(4):322-37.
7
Scanning force microscopy of DNA deposited onto mica: equilibration versus kinetic trapping studied by statistical polymer chain analysis.沉积在云母上的DNA的扫描力显微镜:通过统计聚合物链分析研究平衡与动力学捕获
J Mol Biol. 1996 Dec 20;264(5):919-32. doi: 10.1006/jmbi.1996.0687.
8
[Compaction of single molecules of supercoiled DNA immobilized on amino mica: from duplex to minitoroidal and spheroidal conformations].[固定在氨基云母上的超螺旋DNA单分子的压缩:从双链到微环形和球形构象]
Biofizika. 2007 Mar-Apr;52(2):252-60.
9
Anionic polyelectrolyte adsorption on mica mediated by multivalent cations: a solution to DNA imaging by atomic force microscopy under high ionic strengths.多价阳离子介导的阴离子聚电解质在云母上的吸附:高离子强度下原子力显微镜对DNA成像的一种解决方案。
Langmuir. 2006 Jul 18;22(15):6651-60. doi: 10.1021/la053387y.
10
[S-DNA is oversupercoiled DNA with 1.94-2.19 A rise per base pair along duplex axis].
Mol Biol (Mosk). 2006 Jan-Feb;40(1):122-36.

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