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组氨酸磷酸载体蛋白(HPr)的结构与功能

The structure and function of HPr.

作者信息

Waygood E B

机构信息

Department of Biochemistry, University of Saskatchewan, Saskatoon, Canada.

出版信息

Biochem Cell Biol. 1998;76(2-3):359-67. doi: 10.1139/bcb-76-2-3-359.

DOI:10.1139/bcb-76-2-3-359
PMID:9923705
Abstract

Histidine-containing phosphocarrier protein, HPr, was one of the early protein tertiary structures determined by two-dimensional 1H-NMR. Tertiary structures for HPrs from Escherichia coli, Bacillus subtilis, and Staphylococcus aureus have been obtained by 1H NMR and the overall folding pattern of HPr is highly conserved, a betaalpha betabeta alphabeta alpha arrangement of three alpha-helices overlaying a four-stranded beta-sheet. High-resolution structures for HPrs from E. coli and B. subtilis have been obtained using 15N- and 13C-labeled proteins. The first application of NMR to the understanding of the structure and function of HPr was to describe the phosphohistidine isomer, Ndelta1-P-histidine in S. aureus phospho-HPr, and the unusual pKas of the His-15 side chain. The pKa values for the His-15 imidazole from more recent studies are 5.4 for HPr and 7.8 for phospho-HPr from E. coli, for example. A consensus description of the active site is proposed for HPr and phospho-HPr. In HPr, His-15 has a defined conformation and N-caps helix A, and is thus affected by the helix dipole. His-15 undergoes a small conformational change upon phosphorylation, a movement to allow the phosphoryl group to be positioned such that it forms hydrogen bonds with the main chain amide nitrogens of residue 16 (not conserved) and Arg-17. Interactions between residue 12 side chain (not conserved: asparagine, serine, and threonine) and His-15, and between the Arg-17 guanidinium group and the phosphoryl group, are either weak or transitory.

摘要

含组氨酸的磷酸载体蛋白HPr是最早通过二维¹H-NMR确定三级结构的蛋白质之一。通过¹H NMR已获得大肠杆菌、枯草芽孢杆菌和金黄色葡萄球菌的HPr三级结构,且HPr的整体折叠模式高度保守,即三个α螺旋叠加在一个四链β折叠上,呈β-α-β-β-α-β-α排列。利用¹⁵N和¹³C标记的蛋白质已获得大肠杆菌和枯草芽孢杆菌HPr的高分辨率结构。NMR首次应用于理解HPr的结构和功能,是描述金黄色葡萄球菌磷酸化HPr中的磷酸组氨酸异构体Nδ¹-P-组氨酸,以及His-15侧链异常的pKa值。例如,最近的研究表明,大肠杆菌HPr中His-15咪唑的pKa值为5.4,磷酸化HPr中为7.8。本文提出了HPr和磷酸化HPr活性位点的共识描述。在HPr中,His-15具有明确的构象并封闭螺旋A,因此受螺旋偶极的影响。His-15在磷酸化时发生微小的构象变化,该移动使磷酸基团能够定位,从而与残基16(不保守)和Arg-17的主链酰胺氮形成氢键。残基12侧链(不保守:天冬酰胺、丝氨酸和苏氨酸)与His-15之间,以及Arg-17胍基与磷酸基团之间的相互作用要么较弱,要么是短暂的。

相似文献

1
The structure and function of HPr.组氨酸磷酸载体蛋白(HPr)的结构与功能
Biochem Cell Biol. 1998;76(2-3):359-67. doi: 10.1139/bcb-76-2-3-359.
2
Structural comparison of the histidine-containing phosphocarrier protein HPr.含组氨酸的磷酸载体蛋白HPr的结构比较
Biochem Cell Biol. 1994 May-Jun;72(5-6):202-17. doi: 10.1139/o94-030.
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Structural consequences of histidine phosphorylation: NMR characterization of the phosphohistidine form of histidine-containing protein from Bacillus subtilis and Escherichia coli.组氨酸磷酸化的结构后果:枯草芽孢杆菌和大肠杆菌中含组氨酸蛋白的磷酸组氨酸形式的核磁共振表征
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4
Mutation of serine-46 to aspartate in the histidine-containing protein of Escherichia coli mimics the inactivation by phosphorylation of serine-46 in HPrs from gram-positive bacteria.大肠杆菌含组氨酸蛋白中丝氨酸-46突变为天冬氨酸,模拟了革兰氏阳性菌中组氨酸磷酸载体蛋白(HPr)丝氨酸-46磷酸化导致的失活。
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High-resolution structure of the phosphorylated form of the histidine-containing phosphocarrier protein HPr from Escherichia coli determined by restrained molecular dynamics from NMR-NOE data.通过基于核磁共振-核欧沃豪斯效应(NMR-NOE)数据的受限分子动力学确定的来自大肠杆菌的含组氨酸磷载体蛋白HPr磷酸化形式的高分辨率结构。
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Identification by NMR of the binding surface for the histidine-containing phosphocarrier protein HPr on the N-terminal domain of enzyme I of the Escherichia coli phosphotransferase system.通过核磁共振鉴定大肠杆菌磷酸转移酶系统中酶I的N端结构域上含组氨酸的磷酸载体蛋白HPr的结合表面。
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Three-dimensional structure of the histidine-containing phosphocarrier protein (HPr) from Enterococcus faecalis in solution.粪肠球菌中含组氨酸的磷酸载体蛋白(HPr)在溶液中的三维结构。
Eur J Biochem. 2001 Feb;268(3):635-44. doi: 10.1046/j.1432-1327.2001.01916.x.
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Structural evidence for the evolutionary divergence of mycoplasma from gram-positive bacteria: the histidine-containing phosphocarrier protein.支原体与革兰氏阳性菌进化分歧的结构证据:含组氨酸的磷酸载体蛋白。
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The solution structure of the histidine-containing protein (HPr) from Staphylococcus aureus as determined by two-dimensional 1H-NMR spectroscopy.通过二维¹H-NMR光谱法测定的金黄色葡萄球菌含组氨酸蛋白(HPr)的溶液结构。
Eur J Biochem. 1993 Aug 15;216(1):205-14. doi: 10.1111/j.1432-1033.1993.tb18134.x.
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Solution structure of the phosphocarrier protein HPr from Bacillus subtilis by two-dimensional NMR spectroscopy.利用二维核磁共振光谱法解析枯草芽孢杆菌磷酸载体蛋白HPr的溶液结构
Protein Sci. 1992 Oct;1(10):1363-76. doi: 10.1002/pro.5560011016.

引用本文的文献

1
Genetic dissection of specificity determinants in the interaction of HPr with enzymes II of the bacterial phosphoenolpyruvate:sugar phosphotransferase system in Escherichia coli.大肠杆菌中磷酸烯醇丙酮酸:糖磷酸转移酶系统的HPr与酶II相互作用中特异性决定因素的遗传剖析。
J Bacteriol. 2007 Jul;189(13):4603-13. doi: 10.1128/JB.00236-07. Epub 2007 Apr 20.
2
How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria.磷酸转移酶系统相关蛋白磷酸化如何调节细菌中的碳水化合物代谢。
Microbiol Mol Biol Rev. 2006 Dec;70(4):939-1031. doi: 10.1128/MMBR.00024-06.