Waygood E B
Department of Biochemistry, University of Saskatchewan, Saskatoon, Canada.
Biochem Cell Biol. 1998;76(2-3):359-67. doi: 10.1139/bcb-76-2-3-359.
Histidine-containing phosphocarrier protein, HPr, was one of the early protein tertiary structures determined by two-dimensional 1H-NMR. Tertiary structures for HPrs from Escherichia coli, Bacillus subtilis, and Staphylococcus aureus have been obtained by 1H NMR and the overall folding pattern of HPr is highly conserved, a betaalpha betabeta alphabeta alpha arrangement of three alpha-helices overlaying a four-stranded beta-sheet. High-resolution structures for HPrs from E. coli and B. subtilis have been obtained using 15N- and 13C-labeled proteins. The first application of NMR to the understanding of the structure and function of HPr was to describe the phosphohistidine isomer, Ndelta1-P-histidine in S. aureus phospho-HPr, and the unusual pKas of the His-15 side chain. The pKa values for the His-15 imidazole from more recent studies are 5.4 for HPr and 7.8 for phospho-HPr from E. coli, for example. A consensus description of the active site is proposed for HPr and phospho-HPr. In HPr, His-15 has a defined conformation and N-caps helix A, and is thus affected by the helix dipole. His-15 undergoes a small conformational change upon phosphorylation, a movement to allow the phosphoryl group to be positioned such that it forms hydrogen bonds with the main chain amide nitrogens of residue 16 (not conserved) and Arg-17. Interactions between residue 12 side chain (not conserved: asparagine, serine, and threonine) and His-15, and between the Arg-17 guanidinium group and the phosphoryl group, are either weak or transitory.
含组氨酸的磷酸载体蛋白HPr是最早通过二维¹H-NMR确定三级结构的蛋白质之一。通过¹H NMR已获得大肠杆菌、枯草芽孢杆菌和金黄色葡萄球菌的HPr三级结构,且HPr的整体折叠模式高度保守,即三个α螺旋叠加在一个四链β折叠上,呈β-α-β-β-α-β-α排列。利用¹⁵N和¹³C标记的蛋白质已获得大肠杆菌和枯草芽孢杆菌HPr的高分辨率结构。NMR首次应用于理解HPr的结构和功能,是描述金黄色葡萄球菌磷酸化HPr中的磷酸组氨酸异构体Nδ¹-P-组氨酸,以及His-15侧链异常的pKa值。例如,最近的研究表明,大肠杆菌HPr中His-15咪唑的pKa值为5.4,磷酸化HPr中为7.8。本文提出了HPr和磷酸化HPr活性位点的共识描述。在HPr中,His-15具有明确的构象并封闭螺旋A,因此受螺旋偶极的影响。His-15在磷酸化时发生微小的构象变化,该移动使磷酸基团能够定位,从而与残基16(不保守)和Arg-17的主链酰胺氮形成氢键。残基12侧链(不保守:天冬酰胺、丝氨酸和苏氨酸)与His-15之间,以及Arg-17胍基与磷酸基团之间的相互作用要么较弱,要么是短暂的。