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(2'-5')和(3'-5')磷酸二酯键对水溶液中胞苷酰-胞苷的构象和堆积性质的影响。

The effect of (2'-5') and (3'-5') phosphodiester linkages on conformational and stacking properties of cytidylyl-cytidine in aqueous solution.

作者信息

Ezra F S, Kondo N S, Ainsworth C F, Danyluk S S

出版信息

Nucleic Acids Res. 1976 Oct;3(10):2549-62. doi: 10.1093/nar/3.10.2549.

DOI:10.1093/nar/3.10.2549
PMID:995643
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC343112/
Abstract

Conformational properties of (2'-5') and (3'-5') CpC have been determined by proton magnetic resonance spectroscopy at 220 MHz. The ribose ring structures are predominantly 3E with the exception of the ring from the 2'-phosphate fragment of C(2'-5')pC which exhibits an 2E pucker. Bases are oriented anti with respect to the ribose and the conformations about C4'-C5', C5'-O5', C3'-O3' (C2'-O2') are gg, g'g', and g+ in equilibrium g-, respectively. The dimers exist as mixtures of stacked (g+g+ and g-g- about the P-O(C) bonds) and unstacked species at 20 degrees C. Stacking is estimated to be 35% in both dimers.

摘要

已通过220兆赫的质子磁共振光谱法测定了(2'-5')和(3'-5')CpC的构象性质。除了来自C(2'-5')pC的2'-磷酸片段的环呈现2E褶皱外,核糖环结构主要为3E。碱基相对于核糖呈反式取向,并且关于C4'-C5'、C5'-O5'、C3'-O3'(C2'-O2')的构象分别为gg、g'g'和g+处于g-平衡态。在20摄氏度时,二聚体以堆叠态(围绕P-O(C)键为g+g+和g-g-)和未堆叠态的混合物形式存在。两种二聚体中的堆叠估计均为35%。

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本文引用的文献

1
Conformational stability of dinucleotides in solution.溶液中二核苷酸的构象稳定性。
J Mol Biol. 1967 May 14;25(3):481-95. doi: 10.1016/0022-2836(67)90200-8.
2
Proton magnetic resonance studies of ribose dinucleoside monophoshates in aqueous solution. I. The nature of the base-stacking interaction in adenylyl 3'--5')adenosine.核糖二核苷单磷酸盐水溶液的质子磁共振研究。I. 腺苷酰基(3'-5')腺苷中碱基堆积相互作用的本质。
J Am Chem Soc. 1969 Jan 1;91(1):168-83. doi: 10.1021/ja01029a033.
3
Studies of the conformation and interaction in dinucleoside mono- and diphosphates by proton magnetic resonance.利用质子磁共振研究二核苷单磷酸和二磷酸中的构象与相互作用。
Biochemistry. 1969 Mar;8(3):997-1029. doi: 10.1021/bi00831a033.
4
The effect of pH upon the nuclear magnetic resonance spectra of nucleosides and nucleotides.pH对核苷和核苷酸核磁共振谱的影响。
Biochemistry. 1968 Mar;7(3):1038-43. doi: 10.1021/bi00843a024.
5
Intermolecular nuclear shielding values for protons of purines and flavins.嘌呤和黄素中质子的分子间核屏蔽值。
J Theor Biol. 1970 Apr;27(1):87-95. doi: 10.1016/0022-5193(70)90130-x.
6
Crystal structure of a naturally occurring dinucleoside phoaphate: uridylyl 3',5'-adenosine phosphate model for RNA chain folding.一种天然存在的二核苷磷酸的晶体结构:用于RNA链折叠的尿苷酰3',5'-腺苷磷酸模型
J Mol Biol. 1972 May 28;66(3):403-21. doi: 10.1016/0022-2836(72)90423-8.
7
Conformational analysis of nucleosides in solution by quantitative application of the nuclear Overhauser effect.
J Am Chem Soc. 1972 Apr 19;94(8):2561-72. doi: 10.1021/ja00763a001.
8
The intramolecular conformation of adenosine 5'-monophosphate in aqueous solution as studied by fast Fourier transform 1H and 1H-(31P) nuclear magnetic resonance spectroscopy.
J Biol Chem. 1974 Aug 10;249(15):4754-9.
9
1H NMR study of the molecular conformation of the exocyclic linkage 5'-beta-nucleotides in solution. Correlation between C(4')-C(5') and C(5')-O(5') conformer populations and the influence of the base.
FEBS Lett. 1973 Aug 15;34(2):323-6. doi: 10.1016/0014-5793(73)80822-1.
10
Conformational analysis of the sugar ring in nucleosides and nucleotides. Improved method for the interpretation of proton magnetic resonance coupling constants.核苷和核苷酸中糖环的构象分析。解释质子磁共振耦合常数的改进方法。
J Am Chem Soc. 1973 Apr 4;95(7):2333-44. doi: 10.1021/ja00788a038.