莱茵衣藻中围绕AUG翻译起始密码子的mRNA序列汇编。

Compilation of mRNA sequences surrounding the AUG translation initiation codon in the green alga Chlamydomonas reinhardtii.

作者信息

Ikeda K, Miyasaka H

机构信息

Kansai Environmental Engineering Center Co. Ltd, Osaka, Japan.

出版信息

Biosci Biotechnol Biochem. 1998 Dec;62(12):2457-9. doi: 10.1271/bbb.62.2457.

DOI:10.1271/bbb.62.2457

PMID:9972275

Abstract

Sequences of 118 mRNAs of the green alga Chlamydomonas reinhardtii in the GenBank data base were compiled to examine the consensus sequence surrounding the AUG translation initiation codon. The consensus sequence for C. reinhardtii was found to be gc(A/C)A(A/C)(A/C) AUGGC. The AUG context of chloroplast proteins (nuclear coded) and non-chloroplast proteins were compared by a separate compilation, and some distinctive features in AUG context of chloroplast proteins were found.

摘要

为了研究紧挨着AUG翻译起始密码子的共有序列，我们整理了GenBank数据库中莱茵衣藻118个mRNA的序列。结果发现莱茵衣藻的共有序列为gc(A/C)A(A/C)(A/C)AUGGC。我们通过单独整理，比较了叶绿体蛋白（核编码）和非叶绿体蛋白的AUG上下文，发现了叶绿体蛋白AUG上下文中的一些显著特征。