Hofmann A H, Codón A C, Ivascu C, Russo V E, Knight C, Cove D, Schaefer D G, Chakhparonian M, Zrÿd J P
Max-Planck-Institut für Molekulare Genetik, Berlin, Germany.
Mol Gen Genet. 1999 Feb;261(1):92-9. doi: 10.1007/s004380050945.
The analysis of phenotypic change resulting from gene disruption following homologous recombination provides a powerful technique for the study of gene function. This technique has so far been difficult to apply to plants because the frequency of gene disruption following transformation with constructs containing DNA homologous to genomic sequences is low (0.01 to 0.1%). It has recently been shown that high rates of gene disruption (up to 90%) can be achieved in the moss Physcomitrella patens using genomic sequences of unknown function. We have used this system to examine the specificity of gene disruption in Physcomitrella using a member of the Cab multigene family. We have employed the previously characterised Cab gene ZLAB1 and have isolated segments of 13 other closely related members of the Cab gene family. In the 199-bp stretch sequenced, the 13 new members of the Cab family show an average of 8.5% divergence from the DNA sequence of ZLAB1. We observed 304 silent substitutions and 16 substitutions that lead to a change in the amino acid sequence of the protein. We cloned 1029 bp of the coding region of ZLAB1 (including 177 of the 199 bp with high homology to the 13 new Cab genes) into a vector containing a selectable hygromycin resistance marker, and used this construct to transform P. patens. In three of nine stable transformants tested, the construct had inserted in, and disrupted, the ZLAB1 gene. There was no discernible phenotype associated with the disruption. We have therefore shown that gene disruption is reproducible in P. patens and that the requirement for sequence homology appears to be stringent, therefore allowing the role of individual members of a gene family to be analysed in land plants for the first time.
对同源重组后基因破坏所导致的表型变化进行分析,为基因功能研究提供了一种强大的技术手段。到目前为止,这项技术很难应用于植物,因为用含有与基因组序列同源的DNA构建体转化后基因破坏的频率很低(0.01%至0.1%)。最近有研究表明,利用功能未知的基因组序列,在小立碗藓中可实现高频率的基因破坏(高达90%)。我们利用这个系统,通过Cab多基因家族的一个成员来检测小立碗藓中基因破坏的特异性。我们采用了先前已鉴定的Cab基因ZLAB1,并分离出了Cab基因家族其他13个密切相关成员的片段。在测序的199个碱基对片段中,Cab家族的13个新成员与ZLAB1的DNA序列平均有8.5%的差异。我们观察到304个沉默替换和16个导致蛋白质氨基酸序列改变的替换。我们将ZLAB1编码区的1029个碱基对(包括与13个新Cab基因具有高度同源性的199个碱基对中的177个)克隆到一个含有可选择的潮霉素抗性标记的载体中,并利用这个构建体转化小立碗藓。在测试的9个稳定转化体中的3个中,该构建体插入并破坏了ZLAB1基因。这种破坏没有明显的表型。因此,我们已经表明基因破坏在小立碗藓中是可重复的,并且对序列同源性的要求似乎很严格,从而首次使得在陆地植物中能够分析基因家族单个成员的作用。