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富含丝氨酸 - 精氨酸(SR)的剪接因子在mRNA前体剪接中具有独立于外显子的功能。

Serine-arginine (SR)-rich splicing factors have an exon-independent function in pre-mRNA splicing.

作者信息

Hertel K J, Maniatis T

机构信息

Department of Molecular and Cellular Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA 02138, USA.

出版信息

Proc Natl Acad Sci U S A. 1999 Mar 16;96(6):2651-5. doi: 10.1073/pnas.96.6.2651.

DOI:10.1073/pnas.96.6.2651
PMID:10077565
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC15823/
Abstract

Two distinct functions have been proposed for the serine-arginine (SR)-rich family of splicing factors. First, SR proteins are essential splicing factors and are thought to function by mediating protein-protein interactions within the intron during spliceosome assembly. Second, SR proteins bind to exonic enhancer sequences and recruit spliceosome components to adjacent introns. The latter activity is required for splice-site recognition and alternative splicing. Until now it has not been possible to determine whether the requirement for SR proteins in the basic splicing reaction is a secondary consequence of their exon-dependent recruitment function. Here we show that RNA substrates containing only 1 nt of exon sequence can undergo the first step of the splicing reaction in vitro and that this activity requires SR proteins. Thus, we provide direct evidence that SR proteins have both exon-independent and exon-dependent functions in pre-mRNA splicing.

摘要

对于富含丝氨酸-精氨酸(SR)的剪接因子家族,人们提出了两种不同的功能。首先,SR蛋白是必不可少的剪接因子,被认为在剪接体组装过程中通过介导内含子内的蛋白质-蛋白质相互作用发挥作用。其次,SR蛋白与外显子增强子序列结合,并将剪接体成分招募到相邻内含子。后一种活性是剪接位点识别和可变剪接所必需的。到目前为止,还无法确定在基本剪接反应中对SR蛋白的需求是否是其外显子依赖性招募功能的次要结果。在这里,我们表明仅含有1个核苷酸外显子序列的RNA底物在体外可以进行剪接反应的第一步,并且这种活性需要SR蛋白。因此,我们提供了直接证据,证明SR蛋白在mRNA前体剪接中具有外显子非依赖性和外显子依赖性功能。

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Serine-arginine (SR)-rich splicing factors have an exon-independent function in pre-mRNA splicing.富含丝氨酸 - 精氨酸(SR)的剪接因子在mRNA前体剪接中具有独立于外显子的功能。
Proc Natl Acad Sci U S A. 1999 Mar 16;96(6):2651-5. doi: 10.1073/pnas.96.6.2651.
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本文引用的文献

1
Selection and characterization of pre-mRNA splicing enhancers: identification of novel SR protein-specific enhancer sequences.前体mRNA剪接增强子的筛选与鉴定:新型SR蛋白特异性增强子序列的识别
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Multiple distinct splicing enhancers in the protein-coding sequences of a constitutively spliced pre-mRNA.组成型剪接前体mRNA的蛋白质编码序列中的多个不同剪接增强子。
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T7 RNA polymerase produces 5' end heterogeneity during in vitro transcription from certain templates.T7 RNA聚合酶在体外转录某些模板时会产生5'端异质性。
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Arginine/serine-rich domains of SR proteins can function as activators of pre-mRNA splicing.SR蛋白富含精氨酸/丝氨酸的结构域可作为前体mRNA剪接的激活剂。
Mol Cell. 1998 Apr;1(5):765-71. doi: 10.1016/s1097-2765(00)80076-3.
5
The function of multisite splicing enhancers.多位点剪接增强子的功能。
Mol Cell. 1998 Feb;1(3):449-55. doi: 10.1016/s1097-2765(00)80045-3.
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Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins.鉴定由单个SR蛋白识别的功能性外显子剪接增强子基序。
Genes Dev. 1998 Jul 1;12(13):1998-2012. doi: 10.1101/gad.12.13.1998.
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A cooperative interaction between U2AF65 and mBBP/SF1 facilitates branchpoint region recognition.U2AF65与mBBP/SF1之间的协同相互作用有助于分支点区域识别。
Genes Dev. 1998 Mar 15;12(6):858-67. doi: 10.1101/gad.12.6.858.
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Bimolecular exon ligation by the human spliceosome.人类剪接体介导的双分子外显子连接
Science. 1997 Jun 13;276(5319):1712-6. doi: 10.1126/science.276.5319.1712.
9
Protein functions in pre-mRNA splicing.蛋白质在前体信使核糖核酸剪接中的功能。
Curr Opin Cell Biol. 1997 Jun;9(3):320-8. doi: 10.1016/s0955-0674(97)80003-8.
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Common themes in the function of transcription and splicing enhancers.转录增强子和剪接增强子功能的共同主题。
Curr Opin Cell Biol. 1997 Jun;9(3):350-7. doi: 10.1016/s0955-0674(97)80007-5.