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酵母中通过人工募集实现的转录激活受启动子结构和下游序列的影响。

Transcriptional activation by artificial recruitment in yeast is influenced by promoter architecture and downstream sequences.

作者信息

Gaudreau L, Keaveney M, Nevado J, Zaman Z, Bryant G O, Struhl K, Ptashne M

机构信息

Molecular Biology Program, Sloan-Kettering Institute, New York, NY 10021, USA.

出版信息

Proc Natl Acad Sci U S A. 1999 Mar 16;96(6):2668-73. doi: 10.1073/pnas.96.6.2668.

DOI:10.1073/pnas.96.6.2668
PMID:10077568
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC15826/
Abstract

The idea that recruitment of the transcriptional machinery to a promoter suffices for gene activation is based partly on the results of "artificial recruitment" experiments performed in vivo. Artificial recruitment can be effected by a "nonclassical" activator comprising a DNA-binding domain fused to a component of the transcriptional machinery. Here we show that activation by artificial recruitment in yeast can be sensitive to any of three factors: position of the activator-binding elements, sequence of the promoter, and coding sequences downstream of the promoter. In contrast, classical activators worked efficiently at all promoters tested. In all cases the "artificial recruitment" fusions synergized well with classical activators. A classical activator evidently differs from a nonclassical activator in that the former can touch multiple sites on the transcriptional machinery, and we propose that that difference accounts for the broader spectrum of activity of the typical classical activator. A similar conclusion is reached from studies in mammalian cells in the accompanying paper [Nevado, J., Gaudreau, L., Adam, M. & Ptashne, M. (1999) Proc. Natl. Acad. Sci. USA 96, 2674-2677].

摘要

转录机制被招募到启动子上就足以激活基因,这一观点部分基于在体内进行的“人工招募”实验结果。人工招募可通过一种“非经典”激活剂来实现,该激活剂由与转录机制的一个组分融合的DNA结合结构域组成。在此我们表明,酵母中通过人工招募实现的激活可能对三个因素中的任何一个敏感:激活剂结合元件的位置、启动子的序列以及启动子下游的编码序列。相比之下,经典激活剂在所有测试的启动子上都能有效发挥作用。在所有情况下,“人工招募”融合物都能与经典激活剂很好地协同作用。经典激活剂显然与非经典激活剂不同,前者可以接触转录机制上的多个位点,我们认为这种差异解释了典型经典激活剂更广泛的活性谱。在随附论文中对哺乳动物细胞的研究也得出了类似结论[内瓦多,J.,高德罗,L.,亚当,M. & 普塔什内,M.(1999年)《美国国家科学院院刊》96,2674 - 2677]。

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本文引用的文献

1
Transcriptional activation by artificial recruitment in mammalian cells.哺乳动物细胞中通过人工招募实现的转录激活。
Proc Natl Acad Sci U S A. 1999 Mar 16;96(6):2674-7. doi: 10.1073/pnas.96.6.2674.
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Imposing specificity by localization: mechanism and evolvability.通过定位施加特异性:机制与进化能力
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Temporal regulation of RNA polymerase II by Srb10 and Kin28 cyclin-dependent kinases.Srb10和Kin28细胞周期蛋白依赖性激酶对RNA聚合酶II的时间调控。
Mol Cell. 1998 Jul;2(1):43-53. doi: 10.1016/s1097-2765(00)80112-4.
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Activator-mediated recruitment of the RNA polymerase II machinery is the predominant mechanism for transcriptional activation in yeast.激活剂介导的RNA聚合酶II机制的募集是酵母中转录激活的主要机制。
Mol Cell. 1998 May;1(6):917-24. doi: 10.1016/s1097-2765(00)80091-x.
5
Activation of transcription in vitro by recruitment of the yeast RNA polymerase II holoenzyme.通过募集酵母RNA聚合酶II全酶在体外激活转录。
Mol Cell. 1998 May;1(6):913-6. doi: 10.1016/s1097-2765(00)80090-8.
6
Conversion of the omega subunit of Escherichia coli RNA polymerase into a transcriptional activator or an activation target.大肠杆菌RNA聚合酶的ω亚基向转录激活因子或激活靶点的转变。
Genes Dev. 1998 Mar 1;12(5):745-54. doi: 10.1101/gad.12.5.745.
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Histone acetylation and transcriptional regulatory mechanisms.组蛋白乙酰化与转录调控机制。
Genes Dev. 1998 Mar 1;12(5):599-606. doi: 10.1101/gad.12.5.599.
8
The yeast HPR1 gene has a functional role in transcriptional elongation that uncovers a novel source of genome instability.酵母HPR1基因在转录延伸中具有功能性作用,揭示了基因组不稳定的新来源。
Genes Dev. 1997 Dec 15;11(24):3459-70. doi: 10.1101/gad.11.24.3459.
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A multiplicity of mediators: alternative forms of transcription complexes communicate with transcriptional regulators.多种介质:转录复合物的不同形式与转录调节因子相互作用。
Nucleic Acids Res. 1997 Dec 15;25(24):4861-5. doi: 10.1093/nar/25.24.4861.
10
Synergistic and promoter-selective activation of transcription by recruitment of transcription factors TFIID and TFIIB.通过募集转录因子TFIID和TFIIB实现转录的协同和启动子选择性激活。
Proc Natl Acad Sci U S A. 1997 Jul 22;94(15):8036-41. doi: 10.1073/pnas.94.15.8036.