Sukumar N, Biswal B K, Vijayan M
Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India.
Acta Crystallogr D Biol Crystallogr. 1999 Apr;55(Pt 4):934-7. doi: 10.1107/s0907444998015522.
The structures of orthorhombic lysozyme grown at basic pH and its low-humidity variant have been solved and refined at 1.9 and 2.0 A resolution, respectively. A comparison of the native structure with those of crystals grown at acidic pH does not show any systematic pH-dependent difference in the molecular geometry. The conformations, mutual orientation and interactions of the catalytic residues Glu35 and Asp52 also remain unchanged. However, comparison between the native and low-humidity forms in the orthorhombic form show that the changes in molecular geometry which accompany the water-mediated transformation to the low-humidity form are more pronounced in the C-terminal residues than in the other regions of the molecule. During the transformation from the native to the low-humidity form, the locations of only about half the water molecules in the hydration shell remain unchanged, but the hydration shell as a whole moves along with the protein molecule.
在碱性pH条件下生长的正交晶系溶菌酶及其低湿度变体的结构已分别在1.9埃和2.0埃分辨率下得到解析和精修。将天然结构与在酸性pH条件下生长的晶体结构进行比较,未发现分子几何结构存在任何系统的pH依赖性差异。催化残基Glu35和Asp52的构象、相互取向及相互作用也保持不变。然而,正交晶系中天然形式与低湿度形式之间的比较表明,伴随水介导转变为低湿度形式的分子几何结构变化在C端残基中比在分子的其他区域更为明显。在从天然形式转变为低湿度形式的过程中,水化层中只有约一半水分子的位置保持不变,但水化层整体随蛋白质分子移动。