Suppr超能文献

大分子结构的沉积

Deposition of macromolecular structures.

作者信息

Keller P A, Henrick K, McNeil P, Moodie S, Barton G J

机构信息

Macromolecular Structure Database Group, EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD,

出版信息

Acta Crystallogr D Biol Crystallogr. 1998 Nov 1;54(Pt 6 Pt 1):1105-8. doi: 10.1107/s0907444998008464.

Abstract

Macromolecular structures are being determined at an increasing rate, and are of interest to a wide diversity of researchers. Depositing a macromolecular structure with the Protein Data Bank makes it readily available to the community. Accuracy, consistency and machine-readability of the data are essential, as are clear indications of quality, and sufficient information to allow non-experimentalists to interpret the data. Good-quality depositions are necessary to allow this to be achieved. The PDB's AutoDep system allows deposition and some preliminary automatic checking to take place at multiple sites, prior to full processing and release of the structure by the PDB. However, depositing a structure currently requires the manual entry of a large amount of information at the time of deposition. The data-harvesting approach will allow much more information to be deposited, without placing an additional burden on the depositor. Deposition-ready files will be generated automatically during the course of a structure-determination experiment. The additional information will allow improved validation procedures to be applied to the structures, and the data to be made more useful to the wider scientific community.

摘要

大分子结构的确定速度正在不断加快,受到了众多研究人员的关注。向蛋白质数据库(Protein Data Bank)存入大分子结构可使其方便地供科学界使用。数据的准确性、一致性和机器可读性至关重要,质量的明确标识以及足够的信息以便非专业人员解读数据也同样重要。高质量的存入对于实现这一点是必要的。蛋白质数据库的自动存入系统允许在多个站点进行存入和一些初步的自动检查,然后由蛋白质数据库进行全面处理并发布结构。然而,目前存入一个结构需要在存入时手动输入大量信息。数据收集方法将允许存入更多信息,而不会给存入者带来额外负担。在结构确定实验过程中将自动生成可用于存入的文件。这些额外信息将使针对结构的验证程序得到改进,并使数据对更广泛的科学界更有用。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验