• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

造礁石珊瑚鹿角珊瑚属细胞色素b进化速率异常低。

Atypically low rate of cytochrome b evolution in the scleractinian coral genus Acropora.

作者信息

van Oppen M J, Willis B L, Miller D J

机构信息

Department of Biochemistry and Molecular Biology, James Cook University, Townsville, Australia.

出版信息

Proc Biol Sci. 1999 Jan 22;266(1415):179-83. doi: 10.1098/rspb.1999.0619.

DOI:10.1098/rspb.1999.0619
PMID:10097392
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1689658/
Abstract

Unexpectedly low levels of mitochondrial DNA (mtDNA) cytochrome b sequence divergence are found between species of the scleractinian coral genus Acropora. Comparison of 964 positions of the cytochrome b gene of two out of the three Caribbean Acropora species with seven of their Pacific congeners shows only 0.3-0.8% sequence difference. Species in these biogeographic regions have been evolving independently for at least three million years (since the rise of the Isthmus of Panama) and this geological date is used to estimate nucleotide divergence rates. The results indicate that the Acropora cytochrome b gene is evolving at least 10-20 times slower than the 'standard' vertebrate mtDNA clock and is one of the most slowly evolving animal mitochondrial genes described to date. The possibility is discussed that, unlike higher animals, cnidarians may have a functional mtDNA mismatch repair system.

摘要

在鹿角珊瑚属的石珊瑚物种之间,发现线粒体DNA(mtDNA)细胞色素b序列差异水平出乎意料地低。对三种加勒比鹿角珊瑚物种中的两种及其七种太平洋同属物种的细胞色素b基因的964个位置进行比较,结果显示序列差异仅为0.3 - 0.8%。这些生物地理区域的物种至少已经独立进化了300万年(自巴拿马地峡隆起以来),并且这个地质年代被用于估计核苷酸差异率。结果表明,鹿角珊瑚的细胞色素b基因的进化速度比“标准”脊椎动物线粒体DNA时钟慢至少10 - 20倍,并且是迄今为止所描述的进化最慢的动物线粒体基因之一。文章讨论了一种可能性,即与高等动物不同,刺胞动物可能具有功能性的线粒体DNA错配修复系统。

相似文献

1
Atypically low rate of cytochrome b evolution in the scleractinian coral genus Acropora.造礁石珊瑚鹿角珊瑚属细胞色素b进化速率异常低。
Proc Biol Sci. 1999 Jan 22;266(1415):179-83. doi: 10.1098/rspb.1999.0619.
2
Mitochondrial DNA rates and biogeography in European newts (genus Euproctus).欧洲蝾螈(真螈属)的线粒体DNA速率与生物地理学
Syst Biol. 1997 Mar;46(1):126-44. doi: 10.1093/sysbio/46.1.126.
3
A mitochondrial cytochrome B phylogeny of the Alectoris partridges.石鸡属鹧鸪线粒体细胞色素B系统发育研究
Mol Phylogenet Evol. 1996 Oct;6(2):214-27. doi: 10.1006/mpev.1996.0072.
4
Evolution of the mitochondrial DNA control region and cytochrome b genes and the inference of phylogenetic relationships in the avian genus Lophura (Galliformes).雉属(鸡形目)线粒体DNA控制区和细胞色素b基因的进化及系统发育关系推断
Mol Phylogenet Evol. 2001 May;19(2):187-201. doi: 10.1006/mpev.2001.0922.
5
The evolutionary history of the coral genus Acropora (Scleractinia, Cnidaria) based on a mitochondrial and a nuclear marker: reticulation, incomplete lineage sorting, or morphological convergence?基于线粒体和核标记的鹿角珊瑚属(石珊瑚目,刺胞动物门)的进化史:网状进化、不完全谱系分选还是形态趋同?
Mol Biol Evol. 2001 Jul;18(7):1315-29. doi: 10.1093/oxfordjournals.molbev.a003916.
6
Mutation and selection at silent and replacement sites in the evolution of animal mitochondrial DNA.动物线粒体DNA进化过程中沉默位点和替换位点的突变与选择
Genetica. 1998;102-103(1-6):393-407.
7
Phylogenetic relationships of pocket gophers (Cratogeomys and Pappogeomys) based on mitochondrial DNA cytochrome b sequences.基于线粒体DNA细胞色素b序列的囊鼠(粗毛囊鼠属和粗毛囊鼠属)的系统发育关系。
Mol Phylogenet Evol. 1993 Sep;2(3):193-204. doi: 10.1006/mpev.1993.1020.
8
No variation and low synonymous substitution rates in coral mtDNA despite high nuclear variation.尽管核基因存在高度变异,但珊瑚线粒体DNA没有变异且同义替换率较低。
BMC Evol Biol. 2006 Mar 16;6:24. doi: 10.1186/1471-2148-6-24.
9
Rates of mitochondrial DNA evolution in sharks are slow compared with mammals.与哺乳动物相比,鲨鱼线粒体DNA的进化速率较慢。
Nature. 1992 May 14;357(6374):153-5. doi: 10.1038/357153a0.
10
Evolution of a mitochondrial cytochrome b gene sequence in the species-rich genus sebastes (Teleostei, Scorpaenidae) and its utility in testing the monophyly of the subgenus Sebastomus.物种丰富的平鲉属(硬骨鱼纲,鲉科)中线粒体细胞色素b基因序列的演化及其在检验平鲉亚属单系性方面的应用。
Mol Phylogenet Evol. 1999 Apr;11(3):426-40. doi: 10.1006/mpev.1998.0584.

引用本文的文献

1
Species and population genomic differentiation in Pocillopora corals (Cnidaria, Hexacorallia).石珊瑚属(刺胞动物门,六放珊瑚亚纲)的物种和种群基因组分化。
Genetica. 2022 Oct;150(5):247-262. doi: 10.1007/s10709-022-00165-7. Epub 2022 Sep 9.
2
What's left in the tank? Identification of non-ascribed aquarium's coral collections with DNA barcodes as part of an integrated diagnostic approach.水族箱里还剩下什么?利用DNA条形码鉴定来源不明的水族箱珊瑚藏品,作为综合诊断方法的一部分。
Conserv Genet Resour. 2022;14(2):167-182. doi: 10.1007/s12686-021-01250-3. Epub 2022 Jan 11.
3
Identification of scleractinian coral recruits using fluorescent censusing and DNA barcoding techniques.使用荧光普查和DNA条形码技术鉴定石珊瑚幼体
PLoS One. 2014 Sep 11;9(9):e107366. doi: 10.1371/journal.pone.0107366. eCollection 2014.
4
Phylogenetic evidence for recent diversification of obligate coral-dwelling gobies compared with their host corals.与宿主珊瑚相比,专性珊瑚栖息虾虎鱼近期多样化的系统发育证据。
Mol Phylogenet Evol. 2013 Oct;69(1):123-32. doi: 10.1016/j.ympev.2013.04.033. Epub 2013 May 13.
5
First complete mitochondrial genome sequence from a box jellyfish reveals a highly fragmented linear architecture and insights into telomere evolution.首例箱形水母线粒体基因组序列揭示了高度碎片化的线性结构和端粒进化的见解。
Genome Biol Evol. 2012;4(1):52-8. doi: 10.1093/gbe/evr127. Epub 2011 Nov 24.
6
Ecomorph or endangered coral? DNA and microstructure reveal hawaiian species complexes: Montipora dilatata/flabellata/turgescens & M. patula/verrilli.生态形态还是濒危珊瑚?DNA 和微观结构揭示夏威夷种属复合体:多孔鹿角珊瑚/扁鹿角珊瑚/膨胀鹿角珊瑚和鹿角珊瑚/疣鹿角珊瑚。
PLoS One. 2010 Dec 2;5(12):e15021. doi: 10.1371/journal.pone.0015021.
7
Shape-shifting corals: molecular markers show morphology is evolutionarily plastic in Porites.形态多变的珊瑚:分子标记显示,在孔珊瑚属中,形态在进化上具有可塑性。
BMC Evol Biol. 2009 Feb 24;9:45. doi: 10.1186/1471-2148-9-45.
8
Secondary structure of the rRNA ITS2 region reveals key evolutionary patterns in acroporid corals.核糖体RNA ITS2区域的二级结构揭示了鹿角珊瑚的关键进化模式。
J Mol Evol. 2008 Oct;67(4):389-96. doi: 10.1007/s00239-008-9160-y. Epub 2008 Sep 10.
9
Comparative analyses of coding and noncoding DNA regions indicate that Acropora (Anthozoa: Scleractina) possesses a similar evolutionary tempo of nuclear vs. mitochondrial genomes as in plants.对编码和非编码DNA区域的比较分析表明,鹿角珊瑚属(珊瑚纲:石珊瑚目)的核基因组与线粒体基因组的进化速度与植物相似。
Mar Biotechnol (NY). 2009 Jan-Feb;11(1):141-52. doi: 10.1007/s10126-008-9129-2. Epub 2008 Aug 1.
10
Unique mitogenomic features in the scleractinian family pocilloporidae (scleractinia: astrocoeniina).鹿角珊瑚科(石珊瑚目:星孔珊瑚亚目)独特的线粒体基因组特征
Mar Biotechnol (NY). 2008 Sep-Oct;10(5):538-53. doi: 10.1007/s10126-008-9093-x. Epub 2008 May 14.

本文引用的文献

1
Isotopic paleoceanography of the Caribbean and East pacific: role of panama uplift in late neogene time.加勒比海和东太平洋的同位素古海洋学:晚新生代巴拿马隆起的作用。
Science. 1982 Jul 23;217(4557):350-3. doi: 10.1126/science.217.4557.350.
2
Mass spawning in tropical reef corals.大规模繁殖在热带珊瑚礁中。
Science. 1984 Mar 16;223(4641):1186-9. doi: 10.1126/science.223.4641.1186.
3
Mitochondrial DNA of the coral Sarcophyton glaucum contains a gene for a homologue of bacterial MutS: a possible case of gene transfer from the nucleus to the mitochondrion.灰肉珊瑚(Sarcophyton glaucum)的线粒体DNA含有一个与细菌MutS同源的基因:这可能是一个基因从细胞核转移到线粒体的例子。
J Mol Evol. 1998 Apr;46(4):419-31. doi: 10.1007/pl00006321.
4
Large, rapidly evolving intergenic spacers in the mitochondrial DNA of the salamander family Ambystomatidae (Amphibia: Caudata).蝾螈科(两栖纲:有尾目)线粒体DNA中大型、快速进化的基因间隔区
Mol Biol Evol. 1997 Nov;14(11):1167-76. doi: 10.1093/oxfordjournals.molbev.a025726.
5
Variation in the ribosomal internal transcribed spacers and 5.8S rDNA among five species of Acropora (Cnidaria; Scleractinia): patterns of variation consistent with reticulate evolution.五种鹿角珊瑚(刺胞动物门;石珊瑚目)核糖体内部转录间隔区和5.8S核糖体DNA的变异:与网状进化一致的变异模式
Mol Biol Evol. 1997 May;14(5):465-73. doi: 10.1093/oxfordjournals.molbev.a025783.
6
A molecular phylogeny for marine turtles: trait mapping, rate assessment, and conservation relevance.海龟的分子系统发育:性状映射、速率评估及保护意义。
Proc Natl Acad Sci U S A. 1993 Jun 15;90(12):5574-7. doi: 10.1073/pnas.90.12.5574.
7
Divergence in proteins, mitochondrial DNA, and reproductive compatibility across the isthmus of Panama.巴拿马地峡两侧蛋白质、线粒体DNA及生殖兼容性的差异。
Science. 1993 Jun 11;260(5114):1629-32. doi: 10.1126/science.8503007.
8
Body size, metabolic rate, generation time, and the molecular clock.身体大小、代谢率、世代时间和分子钟。
Proc Natl Acad Sci U S A. 1993 May 1;90(9):4087-91. doi: 10.1073/pnas.90.9.4087.
9
Mitochondrial DNA of the sea anemone, Metridium senile (Cnidaria): prokaryote-like genes for tRNA(f-Met) and small-subunit ribosomal RNA, and standard genetic code specificities for AGR and ATA codons.海葵(Metridium senile,刺胞动物门)的线粒体DNA:tRNA(f-Met)和小亚基核糖体RNA的类原核生物基因,以及AGR和ATA密码子的标准遗传密码特异性
J Mol Evol. 1994 Oct;39(4):387-99. doi: 10.1007/BF00160271.
10
Molecular evolution at subzero temperatures: mitochondrial and nuclear phylogenies of fishes from Antarctica (suborder Notothenioidei), and the evolution of antifreeze glycopeptides.零下温度下的分子进化:南极鱼类(南极鱼亚目)的线粒体和核系统发育,以及抗冻糖肽的进化。
Mol Biol Evol. 1994 Nov;11(6):854-63. doi: 10.1093/oxfordjournals.molbev.a040168.